GEO DataSets

(Submitter supplied) A midgut reference sample is compared to midgut samples taken at various stages before (18h, 4h), at (0h), and after (2h, 3h, 4h, 5h, 6h, 8h, 10h, 12h) puparium formation. Keywords = Drosophila, ecdysone, network, genomic, microarray, organogenesis, EcR, midgut, central nervous system, salivary gland, epidermis, imaginal disc, development Keywords: other

Organism:

Drosophila melanogaster

Type:

Expression profiling by array

Dataset:

GDS443

Platform:

GPL248

33 Samples

Download data

Temporal analysis of midgut development. Examined 11 time points between 18 hours before puparium formation (BPF) to 12 hours after puparium formation (APF) as larval midgut is replaced by adult midgut in Canton S strain.

Organism:

Drosophila melanogaster

Type:

Expression profiling by array, log ratio, 11 development stage sets

Platform:

GPL248

Series:

GSE543

33 Samples

Download data

(Submitter supplied) Spotted array using PCR fragments of approximately 95% of the genes in the D. melanogaster BDGP genome. We followed a sequence of decreasingly stringent tests to pick optimal primer pairs for the PCR fragments on the arrays. For each gene, we looked for (first) a 500b to 2kb sequence at the 3’ end and, failing this, (second) two 200b to 500b sequences in:(1) coding sequence, completely within an EST clot, and unduplicated (BLAST<=10^-4); (2) coding sequence, partially within an EST clot, unduplicated; (3) coding sequence, unduplicated; (4) exon, completely within an EST clot, unduplicated; (5) exon, partially within an EST clot, unduplicated; (6) exon, unduplicated; (7) sequence less than 2kb at the 3’ end. more...

Organism:

Drosophila melanogaster

2 DataSets

7 Series

175 Samples

Download data