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Items: 3

1.

Translational initiation in E. coli occurs at the correct sites genome-wide in the absence of mRNA-rRNA base-pairing

(Submitter supplied) Shine-Dalgarno (SD) motifs are thought to play an important role in translational initiation in bacteria. Paradoxically, ribosome profiling studies in E. coli show no correlation between the strength of the SD in an mRNA and how efficiently it is translated. Performing profiling on ribosomes with altered anti-Shine-Dalgarno sequences, we reveal a genome-wide correlation between SD strength and ribosome occupancy that was previously masked by other contributing factors. more...
Organism:
Escherichia coli str. K-12 substr. MG1655
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL18956
41 Samples
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Series
Accession:
GSE135906
ID:
200135906

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Escherichia coli str. K-12 substr. MG1655)

Organism:
Escherichia coli str. K-12 substr. MG1655
30 Series
530 Samples
Download data
Platform
Accession:
GPL18956
ID:
100018956

3.

StRP_O_lysate2

Organism:
Escherichia coli str. K-12 substr. MG1655
Source name:
cell cultures
Platform:
GPL18956
Series:
GSE135906
Download data
Sample
Accession:
GSM4037712
ID:
304037712

SRA Run Selector

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db=gds|term=GSM4037712[Accession]|query=1|qty=2|blobid=MCID_674f96002ced8a147a29fd11|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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