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Items: 3

1.

High-Throughput Single-Molecule R-loop Footprinting Reveals Principles of R-loop Formation

(Submitter supplied) We have successfully characterized R-loop structures using non-denaturing bisulfite treatment coupled with single-molecule sequencing to reveal that R-loops form defined overlapping molecular clusters around promoter, gene body, and terminal regions of genes. Our results uncovers that R-loop formation is both driven by favorable DNA sequence as well as topological state.
Organism:
Escherichia coli; Homo sapiens
Type:
Other
Platforms:
GPL24462 GPL21311 GPL20301
8 Samples
Download data: BIGWIG, GFF
Series
Accession:
GSE130726
ID:
200130726

SRA Run Selector

2.

PacBio RS II (Homo sapiens)

Organism:
Homo sapiens
19 Series
119 Samples
Download data
Platform
Accession:
GPL21311
ID:
100021311

3.

DRIP enriched and RNaseH treated

Organism:
Homo sapiens
Source name:
NTERA-2 cell line
Platform:
GPL21311
Series:
GSE130726
Download data: GFF
Sample
Accession:
GSM3772635
ID:
303772635

SRA Run Selector

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db=gds|term=GSM3772635[Accession]|query=1|qty=3|blobid=MCID_674f83ad68e51b28f58256d8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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