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Items: 3

1.

MULTI-seq: Universal sample multiplexing for single-cell RNA sequencing using lipid-tagged indices

(Submitter supplied) We report the development of MULTI-seq: a scRNA-seq and snRNA-seq sample multiplexing approach using lipid- or cholesterol-modified oligonucleotides. We demonstrate MULTI-seq utility in the following scRNA-seq and snRNA-seq contexts: (1) Live HEKs and HMECs with and without stimulation with TGF-β, (2) Purified nuclei from HEKs, MEFs, and Jurkats stimulated for 0-24 hrs with ionomycin and PMA, (3) 96 unique HMEC cultures (with one technical replicate), and (4) human metastases and mouse immune cells isolated from cryopreserved primary tissue samples dissected from a patient-derived xenograft mouse model of triple-negative breast cancer at progressive stages of metastasis to the lung.
Organism:
Mus musculus; Homo sapiens
Type:
Expression profiling by high throughput sequencing
4 related Platforms
24 Samples
Download data: MTX
Series
Accession:
GSE129578
ID:
200129578
2.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
3.

96plexHMEC_original_Lane1

Organism:
Homo sapiens
Source name:
HMEC
Platform:
GPL24676
Series:
GSE129578
Download data
Sample
Accession:
GSM3716614
ID:
303716614
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db=gds|term=GSM3716614[Accession]|query=1|qty=3|blobid=MCID_675963dfdf415c74f8b8c279|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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