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Items: 4

1.

Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL21626 GPL24625 GPL21697
82 Samples
Download data: CSV, TBI, TSV
Series
Accession:
GSE123581
ID:
200123581
2.

High-throughput combinatorial indexing enables scalable single-cell chromatin accessibility profiling [Bone marrow]

(Submitter supplied) While recent technical advancements have facilitated the mapping of epigenomes at the single-cell resolution, the throughput and quality of these methods have limited the widespread application of these technologies. Here, we describe a high-throughput platform for single-cell assay for transposase accessible chromatin (scATAC-seq) using droplet microfluidics that yields essential qualities for high-throughput profiling, including improvements in per-cell library complexity and throughput. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL21697
16 Samples
Download data: BED, CSV, TBI, TSV, XLSX
Series
Accession:
GSE123580
ID:
200123580
3.

NextSeq 550 (Homo sapiens)

Platform
Accession:
GPL21697
ID:
100021697
4.

HumanBoneMarrow-ht-sciATAC-seq-Channel1

Organism:
Homo sapiens
Source name:
Human bone marrow mononuclear cells
Platform:
GPL21697
Series:
GSE123580 GSE123581
Download data: TBI, TSV
Sample
Accession:
GSM3507392
ID:
303507392
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Supplemental Content

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