U.S. flag

An official website of the United States government

Format
Sort by

Send to:

Choose Destination

Search results

Items: 3

1.

Operon complexity in Rhodobacter capsulatus revealed by integration of dRNA-seq and RNA-seq data

(Submitter supplied) We report a complex operon architecture for R. capsulatus: operons with multiple TSSs and TTSs, genomic regions of high transcriptional activity and novel transcripts. In addition, we present a new 5' and 3' targeted sequencing method for the Ion Torrent PGM. TEX+ and TEX- indicates if the dRNA-seq library was treated with Terminator 5'-Phosphate-Dependent Exonuclease or not. Treatment with TEX degrades every RNA that does not have a 5'-PPP.
Organism:
Rhodobacter capsulatus DE442; Rhodobacter capsulatus SB 1003
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL25365 GPL25364
18 Samples
Download data: BED
Series
Accession:
GSE117537
ID:
200117537

SRA Run Selector

2.

Ion Torrent PGM (Rhodobacter capsulatus DE442)

Organism:
Rhodobacter capsulatus DE442
1 Series
9 Samples
Download data
Platform
Accession:
GPL25364
ID:
100025364

3.

PGM-101: DE442_TEXplus_5prime_dRNA-seq

Organism:
Rhodobacter capsulatus DE442
Source name:
DE442 TEX+ 5'
Platform:
GPL25364
Series:
GSE117537
Download data
Sample
Accession:
GSM3302728
ID:
303302728

SRA Run Selector

Format
Sort by

Send to:

Choose Destination

Supplemental Content

Filters: Manage Filters

db=gds|term=GSM3302728[Accession]|query=1|qty=3|blobid=MCID_679d1310a610c87b423467e8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Important Links

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets
Support Center