GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Homo sapiens; Mus musculus

Type:

Expression profiling by array; Genome variation profiling by SNP array

4 related Platforms

276 Samples

Download data: CEL, CNCHP, IDAT

(Submitter supplied) T-cell prolymphocytic leukemia (T-PLL) is a rare and poor-prognostic mature T-cell malignancy. To address its incomplete molecular concept, we integrated large-scale profiling data of alterations in gene expression, allelic copy number (CN), and nucleotide sequences in 111 well-characterized patients. Besides prominent signatures of T-cell activation and prevalent clonal variants, we also identified novel hot-spots for CN variability, fusion molecules, alternative transcripts, and progression-associated dynamics. more...

Organism:

Mus musculus

Type:

Genome variation profiling by SNP array

Platform:

GPL13147

12 Samples

Download data: CEL, TXT

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Below table was obtained after merging the corresponding CN or SNP annot.csv files provided by Affymetrix: MOUSEDIVm520650.cn.na32.annot.csv #%create_date=2011-09-20 GMT-08:00 14:37:53 #%chip_type=MOUSEDIVm520650 #%genome-species=Mus musculus #%genome-version=mm9 #%genome-version-ucsc=mm9 #%genome-version-ncbi=37 #%genome-version-create_date=2007-07-00 #%dbSNP_date=2010-09-23 #%dbSNP_version=132 #%netaffx-annotation-date=2011-06-22 #%netaffx-annotation-netaffx-build=32 MOUSEDIVm520650.na32.annot.csv #%create_date=2011-10-24 GMT-08:00 16:10:34 #%chip_type=MOUSEDIVm520650 #%genome-species=Mus musculus #%genome-version=mm9 #%genome-version-ucsc=mm9 #%genome-version-ncbi=37 #%genome-version-create_date=2007-07-00 #%dbSNP_date=2010-09-23 #%dbSNP_version=132 #%netaffx-annotation-date=2011-06-22 #%netaffx-annotation-netaffx-build=32 Protocol: see manufacturer's web site

Organism:

Mus musculus

21 Series

395 Samples

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