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Items: 3

1.

Histone H3K4 monomethylation catalyzed by Trr and mammalian COMPASS-like proteins at enhancers is dispensable for development and viability

(Submitter supplied) Histone H3 lysine 4 monomethylation (H3K4me1) is an evolutionarily conserved feature of enhancer chromatin catalyzed by the COMPASS-like methyltransferase family that includes Trr in Drosophila melanogaster and MLL3 (encoded by KMT2C) and MLL4 (encoded by KMT2D) in mammals. Here we demonstrate that Drosophila embryos expressing catalytically deficient Trr eclose and develop to productive adulthood. Parallel experiments with a trr allele that augments enzyme product specificity show that conversion of H3K4me1 at enhancers to H3K4me2 and H3K4me3 is also compatible with life and results in minimal changes in gene expression. Similarly, loss of the catalytic SET domains of MLL3 and MLL4 in mouse embryonic stem cells (mESCs) does not disrupt selfrenewal. Drosophila embryos with trr alleles encoding catalytic mutants manifest subtle developmental abnormalities when subjected to temperature stress or altered cohesin levels. Collectively, our findings suggest that animal development can occur in the context of Trr or mammalian COMPASS-like proteins deficient in H3K4 monomethylation activity and point to a possible role for H3K4me1 on cis-regulatory elements in specific settings to fine-tune transcriptional regulation in response to environmental stress.
Organism:
Mus musculus; Drosophila melanogaster
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19057 GPL19132
93 Samples
Download data: BW
Series
Accession:
GSE95781
ID:
200095781
2.

Illumina NextSeq 500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
487 Series
11751 Samples
Download data
Platform
Accession:
GPL19132
ID:
100019132
3.

dm3.brains.k4m1.ca.rep1

Organism:
Drosophila melanogaster
Source name:
total brains
Platform:
GPL19132
Series:
GSE95781
Download data: BW
Sample
Accession:
GSM2525780
ID:
302525780
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db=gds|term=GSM2525780[Accession]|query=1|qty=3|blobid=MCID_6748e4c3462e1a751e13bc63|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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