GEO DataSets

(Submitter supplied) The discovery of quantitative trait loci (QTL) in model organisms has relied heavily on the ability to perform controlled breeding to generate genotypic and phenotypic diversity. Recently, we and others have demonstrated the use of a set of diverse inbred mice as a QTL mapping population. The use of this population has many advantages, including increased phenotypic diversity, a higher recombination frequency and the ability to collect genotype data in community databases. more...

Organism:

Mus musculus

Type:

Expression profiling by array

Platform:

GPL1073

58 Samples

Download data: CEL

(Submitter supplied) GNF1M We identified a non-redundant set of target sequences for the mouse using the following sources: RefSeq (12,029 sequences), Celera (29,331 sequences), and RIKEN (46,299 sequences). First, all sequences were RepeatMasked to remove repetitive elements. Next, sequence identity between individual sequences was established using pairwise BLAT or BLAST and sim4. The results from single-linkage clustering were further triaged to produce a final target set of 36,182 targets with the highest degree of confidence of computational prediction (biasing toward sequences containing Interpro domains and away from non-coding RNAs). more...

Organism:

Mus musculus

2 DataSets

9 Series

310 Samples

Download data: CDF, CIF, GIN, PROBE, PSI, SIF, TAB