GEO DataSets

(Submitter supplied) Alcohol is a major risk factor for hepatocellular carcinoma (HCC) although the mechanisms underlying the alcohol-related liver carcinogenesis are still poorly understood. Alcohol is known to increase hepatocarcinogenesis possibly by inducing aberrant DNA methylation through the reduced provision of methyl groups within the hepatic one-carbon metabolism. Whether the epigenetically-regulated pathways in alcohol-associated HCC can be reversible or modifiable by nutritional factors is unknown. more...

Organism:

Homo sapiens

Type:

Methylation profiling by array

Platform:

GPL15160

16 Samples

Download data: PAIR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Homo sapiens

Type:

Expression profiling by array; Genome binding/occupancy profiling by array

Platforms:

GPL15160 GPL18451

32 Samples

Download data: PAIR

(Submitter supplied) Format: 3X720K Source: UCSC Build: HG18, NCBI 36 Probe Length: 50-75mer Median Probe Spacing: 104 090618_HG18_CpG_Refseq_Prom_MeDIP.ndf 090618_HG18_CpG_Refseq_Prom_MeDIP.pos 090618_HG18_CpG_Refseq_Prom_MeDIP.gff 090618_HG18_CpG_Refseq_Prom_MeDIP_HX3.ncd Protocol: see manufacturer's website

Organism:

Homo sapiens

4 Series

47 Samples

Download data: GFF, NCD, NDF, POS