GSM135230[Accession] - GEO DataSets

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Items: 4

Select item 2000057871.

Survey of Intra- and Inter-Tumour Heterogeneity of Gene Expression in Cervical Cancer

(Submitter supplied) Purpose: To explore intratumor heterogeneity in gene expression profiles from patients with cervical cancer. Experimental Design: A total of 33 biopsies were obtained from 11 patients, sampling between two and five different areas for each tumor.The extracted RNAwas hybridized onto the Affymetrix U133 Plus 2.0 oligonucleotide chip. The variance of expression within a patient (W), between patients (B) and the total variance (T =W + B) were calculated for each ProbeSet, and the ratio W/T was used as a measure of intratumor heterogeneity. more...

Organism:: Homo sapiens

Type:: Expression profiling by array

Dataset:: GDS2416
Platform:: GPL570
33 Samples

Download data: CEL, EXP

Series

Accession:: GSE5787

ID:: 200005787

Select item 24162.

Different areas of cervical cancer tumors

Analysis of 33 biopsies from 11 cervical cancer patients. Biopsies were obtained from 2 to 5 different areas of each tumor. Results provide insight into the extent of intratumor heterogeneity in gene expression in cervical cancer patients.

Organism:: Homo sapiens

Type:: Expression profiling by array, transformed count, 11 individual sets

Platform:: GPL570
Series:: GSE5787
33 Samples

Download data: CEL, EXP

DataSet

Accession:: GDS2416

ID:: 2416

Select item 1000005703.

[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 06, 2012: annotation table updated with netaffx build 32 June 23, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site Complete coverage of the Human Genome U133 Set plus 6,500 additional genes for analysis of over 47,000 transcripts All probe sets represented on the GeneChip Human Genome U133 Set are identically replicated on the GeneChip Human Genome U133 Plus 2.0 Array. more...