GEO DataSets

(Submitter supplied) Vitis vinifera berries are sensitive towards infection by the necrothopic pathogen Botrytis cinerea leading to important economic losses worldwide. The combined analysis of the transcriptome and metabolome associated with the infection has not been previously performed in grapes or in another fleshy fruit. In an attempt to identify the molecular and metabolic mechanisms associated with the infection, pepper- corn size fruits (EL 29) were infected in-field and green berries (EL 33) and veraison berries (EL 35) were collected for microarray analysis complemented with metabolic profiling using GC-EI-TOF/MS and headspace GC-EI-MS platforms. more...

Organism:

Vitis vinifera

Type:

Expression profiling by array

Platform:

GPL17894

12 Samples

Download data: PAIR

(Submitter supplied) 12-plex array with 135,000 features per subarray. Feature size: 12 um Array is based on the V1 gene prediction by CRIBI of the 12X grape genome assembly produced by the French-Italian consortium. PMID 22554261 for gene annotations for each probe The ID column includes the GENE_CALL_ID (as identified by NimbleScan software). A different version of this platform with the probe names in the ID column is assigned accession number GPL13936 Protocol: Standard NimbleGen manufacture protocol.

Organism:

Vitis vinifera

27 Series

1 Related Platform

946 Samples

Download data: NCD, NDF, NGD, POS