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Items: 12

1.

Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [WGBS]

(Submitter supplied) Adjacent CpG sites in mammalian genomes tend to be co-methylated due to the processivity of enzymes responsible for adding or removing the methyl group. Yet discordant methylation patterns have also be observed, and found to be related to stochastic or uncoordinated molecular processes. Here we focused on a systematic search and investigation of regions in the human genome that exhibit highly coordinated methylation. more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL11154
10 Samples
Download data: BED
Series
Accession:
GSE79215
ID:
200079215

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10560 Series
183756 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

3.

N37-Stomach

Organism:
Homo sapiens
Source name:
stomach
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088211
ID:
302088211

SRA Run Selector

4.

N37-SM

Organism:
Homo sapiens
Source name:
skeletal muscle
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088210
ID:
302088210

SRA Run Selector

5.

N37-SI

Organism:
Homo sapiens
Source name:
small intestine
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088209
ID:
302088209

SRA Run Selector

6.

N37-Pancreas

Organism:
Homo sapiens
Source name:
pancreas
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088208
ID:
302088208

SRA Run Selector

7.

N37-Lung

Organism:
Homo sapiens
Source name:
lung
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088207
ID:
302088207

SRA Run Selector

8.

N37-Liver

Organism:
Homo sapiens
Source name:
liver
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088206
ID:
302088206

SRA Run Selector

9.

N37-Heart

Organism:
Homo sapiens
Source name:
heart
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088205
ID:
302088205

SRA Run Selector

10.

N37-FL

Organism:
Homo sapiens
Source name:
frontal lobe
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088204
ID:
302088204

SRA Run Selector

11.

N37-CRBL

Organism:
Homo sapiens
Source name:
cerebellum
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088203
ID:
302088203

SRA Run Selector

12.

N37-Colon

Organism:
Homo sapiens
Source name:
colon
Platform:
GPL11154
Series:
GSE79215 GSE79279
Download data: BED
Sample
Accession:
GSM2088202
ID:
302088202

SRA Run Selector

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db=gds|term=GSE79215[Accession]|query=1|qty=2|blobid=MCID_674cc60730e6852f8a879c54|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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