GSE67926[Accession] - GEO DataSets - NCBI

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Items: 17

Select item 2000679261.

An ancient symbiotic fungal gene network revealed by comparative transcriptomics [Rirregularis_symbiotic_tissues]

(Submitter supplied) Purpose: The recent publication of the fungal mutualist R. irregularis genome facilitated transcriptomic studies. We here wanted to understand the large host range of this fungus, throught its gene regulation in divergent plants Methods: mRNA from Medicago truncatula (legume), Brachypodium distachyon (grass) and Lunularia cruciata (liverwort) in association with R. irregularis were sequenced. Reads were mapped on the genome assembly with the software CLC workbench. more...

Organism:: Brachypodium distachyon; Lunularia cruciata; Medicago truncatula; Rhizophagus irregularis

Type:: Expression profiling by high throughput sequencing

4 related Platforms
12 Samples

Download data: TXT

Series

Accession:: GSE67926

ID:: 200067926

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000200492.

Illumina HiSeq 2000 (Lunularia cruciata)

Organism:: Lunularia cruciata

1 Series
3 Samples

Platform

Accession:: GPL20049

ID:: 100020049

Select item 1000197343.

Illumina HiSeq 2000 (Rhizophagus irregularis)

Organism:: Rhizophagus irregularis

4 Series
39 Samples

Platform

Accession:: GPL19734

ID:: 100019734

Select item 1000174914.

Illumina HiSeq 2000 (Medicago truncatula)

Organism:: Medicago truncatula

12 Series
410 Samples

Platform

Accession:: GPL17491

ID:: 100017491

Select item 1000173375.

Illumina HiSeq 2000 (Brachypodium distachyon)

Organism:: Brachypodium distachyon

14 Series
139 Samples

Platform

Accession:: GPL17337

ID:: 100017337

Select item 3016585716.

Lunularia / Rhizophagus replicate 3

Organism:: Lunularia cruciata

Source name:: L. cruciata thalli associated with R. irregularis

Platform:: GPL20049
Series:: GSE67926

Sample

Accession:: GSM1658571

ID:: 301658571

SRA Run Selector

Select item 3016585707.

Lunularia / Rhizophagus replicate 2

Organism:: Lunularia cruciata

Source name:: L. cruciata thalli associated with R. irregularis

Platform:: GPL20049
Series:: GSE67926

Sample

Accession:: GSM1658570

ID:: 301658570

SRA Run Selector

Select item 3016585698.

Lunularia / Rhizophagus replicate 1

Organism:: Lunularia cruciata

Source name:: L. cruciata thalli associated with R. irregularis

Platform:: GPL20049
Series:: GSE67926

Sample

Accession:: GSM1658569

ID:: 301658569

SRA Run Selector

Select item 3016585659.

Medicago / Rhizophagus replicate 3

Organism:: Medicago truncatula

Source name:: M. truncatula roots associated with R. irregularis

Platform:: GPL17491
Series:: GSE67926

Sample

Accession:: GSM1658565

ID:: 301658565

SRA Run Selector

Select item 30165856410.

Medicago / Rhizophagus replicate 2

Organism:: Medicago truncatula

Source name:: M. truncatula roots associated with R. irregularis

Platform:: GPL17491
Series:: GSE67926

Sample

Accession:: GSM1658564

ID:: 301658564

SRA Run Selector

Select item 30165856311.

Medicago / Rhizophagus replicate 1

Organism:: Medicago truncatula

Source name:: M. truncatula roots associated with R. irregularis

Platform:: GPL17491
Series:: GSE67926

Sample

Accession:: GSM1658563

ID:: 301658563

SRA Run Selector

Select item 30165856812.

Brachypodium / Rhizophagus replicate 3

Organism:: Brachypodium distachyon

Source name:: B. distachyon roots associated with R. irregularis

Platform:: GPL17337
Series:: GSE67926

Sample

Accession:: GSM1658568

ID:: 301658568

SRA Run Selector

Select item 30165857413.

Rhizophagus ERM replicate 3

Organism:: Rhizophagus irregularis

Source name:: Extra radical mycelium of Rhizophagus irregularis

Platform:: GPL19734
Series:: GSE67926

Sample

Accession:: GSM1658574

ID:: 301658574

SRA Run Selector

Select item 30165856714.

Brachypodium / Rhizophagus replicate 2

Organism:: Brachypodium distachyon

Source name:: B. distachyon roots associated with R. irregularis

Platform:: GPL17337
Series:: GSE67926

Sample

Accession:: GSM1658567

ID:: 301658567

SRA Run Selector

Select item 30165857315.

Rhizophagus ERM replicate 2

Organism:: Rhizophagus irregularis

Source name:: Extra radical mycelium of Rhizophagus irregularis

Platform:: GPL19734
Series:: GSE67926

Sample

Accession:: GSM1658573

ID:: 301658573

SRA Run Selector

Select item 30165856616.

Brachypodium / Rhizophagus replicate 1

Organism:: Brachypodium distachyon

Source name:: B. distachyon roots associated with R. irregularis

Platform:: GPL17337
Series:: GSE67926

Sample

Accession:: GSM1658566

ID:: 301658566

SRA Run Selector

Select item 30165857217.

Rhizophagus ERM replicate 1

Organism:: Rhizophagus irregularis

Source name:: Extra radical mycelium of Rhizophagus irregularis

Platform:: GPL19734
Series:: GSE67926

Sample

Accession:: GSM1658572

ID:: 301658572

SRA Run Selector

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