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Items: 1 to 20 of 21

1.

Splicing events and transcriptome changes upon TDP-43 and FUS knock-down in human neuroblastoma cells

(Submitter supplied) We performed exon array analysis to define and compare the transcriptomic changes, in terms of splicing and gene expression profilings, occurring in human neuroblastoma cells upon knocking down TDP-43 and FUS RNA-binding proteins (RBP), with the final aim to unravel the biological role of these RBPs in neuronal cells.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platforms:
GPL5188 GPL5175
18 Samples
Download data: CEL
Series
Accession:
GSE67027
ID:
200067027

Analyze with GEO2R

2.

[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 Oct 11, 2012: annotation table updated with netaffx build 32 Protocol: See manufacturer's web site
Organism:
Homo sapiens
453 Series
35 Related Platforms
19794 Samples
Download data
Platform
Accession:
GPL5175
ID:
100005175

3.

[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html #%create_date=Wed Mar 11 17:51:22 2009 PDT #%chip_type=HuEx-1_0-st-v2 #%lib_set_name=HuEx-1_0-st #%lib_set_version=v2 #%genome-species=Homo sapiens #%genome-version=hg18 #%genome-version-ucsc=hg18 #%genome-version-ncbi=36 #%genome-version-create_date=2006-03 #%netaffx-annotation-date=2009-03-16 #%netaffx-annotation-netaffx-build=28 Protocol: See manufacturer's web site
Organism:
Homo sapiens
217 Series
10 Related Platforms
9950 Samples
Download data
Platform
Accession:
GPL5188
ID:
100005188

4.

FUS-silenced SK-N-BE cells, biological rep 3 (transcription-level)

Organism:
Homo sapiens
Source name:
siFUS
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636391
ID:
301636391

5.

FUS-silenced SK-N-BE cells, biological rep 2 (transcription-level)

Organism:
Homo sapiens
Source name:
siFUS
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636390
ID:
301636390

6.

FUS-silenced SK-N-BE cells, biological rep 1 (transcription-level)

Organism:
Homo sapiens
Source name:
siFUS
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636389
ID:
301636389

7.

TDP-43-silenced SK-N-BE cells, biological rep 3 (transcription-level)

Organism:
Homo sapiens
Source name:
siTDP-43
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636388
ID:
301636388

8.

TDP-43-silenced SK-N-BE cells, biological rep 2 (transcription-level)

Organism:
Homo sapiens
Source name:
siTDP-43
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636387
ID:
301636387

9.

TDP-43-silenced SK-N-BE cells, biological rep 1 (transcription-level)

Organism:
Homo sapiens
Source name:
siTDP-43
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636386
ID:
301636386

10.

control-silenced SK-N-BE cells, biological rep 3 (transcription-level)

Organism:
Homo sapiens
Source name:
siCTRL
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636385
ID:
301636385

11.

control-silenced SK-N-BE cells, biological rep 2 (transcription-level)

Organism:
Homo sapiens
Source name:
siCTRL
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636384
ID:
301636384

12.

FUS-silenced SK-N-BE cells, biological rep 3 (exon-level)

Organism:
Homo sapiens
Source name:
siFUS
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636400
ID:
301636400

13.

control-silenced SK-N-BE cells, biological rep 1 (transcription-level)

Organism:
Homo sapiens
Source name:
siCTRL
Platform:
GPL5175
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636383
ID:
301636383

14.

FUS-silenced SK-N-BE cells, biological rep 2 (exon-level)

Organism:
Homo sapiens
Source name:
siFUS
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636399
ID:
301636399

15.

FUS-silenced SK-N-BE cells, biological rep 1 (exon-level)

Organism:
Homo sapiens
Source name:
siFUS
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636398
ID:
301636398

16.

TDP-43-silenced SK-N-BE cells, biological rep 3 (exon-level)

Organism:
Homo sapiens
Source name:
siTDP-43
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636397
ID:
301636397

17.

TDP-43-silenced SK-N-BE cells, biological rep 2 (exon-level)

Organism:
Homo sapiens
Source name:
siTDP-43
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636396
ID:
301636396

18.

TDP-43-silenced SK-N-BE cells, biological rep 1 (exon-level))

Organism:
Homo sapiens
Source name:
siTDP-43
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636395
ID:
301636395

19.

control-silenced SK-N-BE cells, biological rep 3 (exon-level)

Organism:
Homo sapiens
Source name:
siCTRL
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636394
ID:
301636394

20.

control-silenced SK-N-BE cells, biological rep 2 (exon-level)

Organism:
Homo sapiens
Source name:
siCTRL
Platform:
GPL5188
Series:
GSE67027
Download data: CEL
Sample
Accession:
GSM1636393
ID:
301636393

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