GEO DataSets

(Submitter supplied) Abstract: Proteins contribute to a major part of the organic nitrogen in forest soils. This nitrogen is mobilized and becomes available to trees as a result of the depolymerizing activities of symbiotic ectomycorrhizal fungi. The mechanisms by which these fungi depolymerize proteins and assimilate the released nitrogen are poorly characterized. Biochemical analysis and transcriptome profiling were performed to examine the proteolytic machinery and the uptake system of the ectomycorrhizal basidiomycete Paxillus involutus during the assimilation of organic nitrogen from various protein sources and extracts of organic matter. more...

Organism:

Paxillus involutus; Paxillus involutus ATCC 200175

Type:

Expression profiling by array

Platform:

GPL14950

12 Samples

Download data: PAIR

(Submitter supplied) NimbleGen design name 101221_ATTCC200175_TJ_EXP_HX12 NimbleGen design OID 33038 NimbleGen DESIGN_ID: 546871 A expression design for 12,214 gene models from the ectomycorrhizal fungus Paxillus involutus ATCC 200175 with approx. 10 tiled 60-mer probes per gene. A web database containing sequences and annotation for the 12,214 gene models here used (mbio-serv2.mbioekol.lu.se/Paxillus/Hybrid/) native array description file: 101221_ATCC200175_TJ_EXP.ndf native array description file: 101221_ATCC200175_TJ_EXP.ngd Protocol: High-density 12-plex DNA arrays (HD2: 12x135K Format) prepared with Maskless Array Synthesizer (MAS) technology (www.nimblegen.com).

Organism:

Paxillus involutus ATCC 200175

6 Series

63 Samples

Download data: NDF, NGD