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Items: 20

1.

The Transition from Primary siRNAs to Amplified Secondary siRNAs that Regulate Chalcone Synthase During Development of Glycine max Seed Coat

(Submitter supplied) The I locus is a 27-kb inverted repeat cluster of chalcone synthase genes CHS1-3-4 that mediates siRNA down-regulation of CHS7 and CHS8 target mRNAs during seed development leading to yellow seed coats lacking anthocyanin pigments. Here, we report small RNA sequencing of ten stages of seed development from a few days post fertilization through maturity, revealing the amplification from primary to secondary short interfering RNAs (siRNAs) occurring during development. more...
Organism:
Glycine max
Type:
Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL11192 GPL15008
17 Samples
Download data: TXT
Series
Accession:
GSE43348
ID:
200043348

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Glycine max)

Organism:
Glycine max
79 Series
1702 Samples
Download data
Platform
Accession:
GPL15008
ID:
100015008

3.

Illumina Genome Analyzer II (Glycine max)

Organism:
Glycine max
13 Series
41 Samples
Download data
Platform
Accession:
GPL11192
ID:
100011192

4.

D105_300_400YSC_BR2

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060828
ID:
301060828

SRA Run Selector

5.

D103_200_300SC_BR2

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060826
ID:
301060826

SRA Run Selector

6.

D54_200_300SC_BR1

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060825
ID:
301060825

SRA Run Selector

7.

D101_75_100SC_BR2

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060824
ID:
301060824

SRA Run Selector

8.

D100_50_75SC_BR2

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060822
ID:
301060822

SRA Run Selector

9.

D99_25_50SC_BR1

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060821
ID:
301060821

SRA Run Selector

10.

D98_10_25SC_BR1

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060820
ID:
301060820

SRA Run Selector

11.

D97_5_6SC_BR2

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060819
ID:
301060819

SRA Run Selector

12.

D56_5_6SC_BR1

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060818
ID:
301060818

SRA Run Selector

13.

D96_22_24DAF_BR2

Organism:
Glycine max
Source name:
whole seed
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060817
ID:
301060817

SRA Run Selector

14.

D52_22_24DAF_BR1

Organism:
Glycine max
Source name:
whole seed
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060816
ID:
301060816

SRA Run Selector

15.

D95_12_14DAF_BR2

Organism:
Glycine max
Source name:
whole seed
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060815
ID:
301060815

SRA Run Selector

16.

D51_12_14DAF_BR1

Organism:
Glycine max
Source name:
whole seed
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060814
ID:
301060814

SRA Run Selector

17.

D94_4DAF_BR2

Organism:
Glycine max
Source name:
whole seed
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060813
ID:
301060813

SRA Run Selector

18.

D53_4DAF_BR1

Organism:
Glycine max
Source name:
whole seed
Platform:
GPL15008
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060812
ID:
301060812

SRA Run Selector

19.

D28_300_400YSC_BR1

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL11192
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060827
ID:
301060827

SRA Run Selector

20.

D33_75_100SC_BR1

Organism:
Glycine max
Source name:
seed coat
Platform:
GPL11192
Series:
GSE43348
Download data: TXT
Sample
Accession:
GSM1060823
ID:
301060823

SRA Run Selector

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db=gds|term=GSE43348[Accession]|query=1|qty=2|blobid=MCID_6750c9918288966b395851e4|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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