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Items: 8

1.

iMir: An integrated pipeline for high-throughput miRNA-Seq data analysis

(Submitter supplied) We report a novel modular pipeline (iMir) for comprehensive analysis of miRNA-Seq data, from linker removal and sequence quality check to differential expression and biological target prediction, integrating multiple open source modules and resources linker together in an automated flow.
Organism:
Homo sapiens
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL10999
6 Samples
Download data: TXT
Series
Accession:
GSE40617
ID:
200040617

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:
Homo sapiens
1102 Series
10066 Samples
Download data
Platform
Accession:
GPL10999
ID:
100010999

3.

Sample_B3

Organism:
Homo sapiens
Source name:
growth-arrested
Platform:
GPL10999
Series:
GSE40617
Download data: TXT
Sample
Accession:
GSM997980
ID:
300997980

SRA Run Selector

4.

Sample_B2

Organism:
Homo sapiens
Source name:
growth-arrested
Platform:
GPL10999
Series:
GSE40617
Download data: TXT
Sample
Accession:
GSM997979
ID:
300997979

SRA Run Selector

5.

Sample_B1

Organism:
Homo sapiens
Source name:
growth-arrested
Platform:
GPL10999
Series:
GSE40617
Download data: TXT
Sample
Accession:
GSM997978
ID:
300997978

SRA Run Selector

6.

Sample_A3

Organism:
Homo sapiens
Source name:
Exponentially growing
Platform:
GPL10999
Series:
GSE40617
Download data: TXT
Sample
Accession:
GSM997977
ID:
300997977

SRA Run Selector

7.

Sample_A2

Organism:
Homo sapiens
Source name:
Exponentially growing
Platform:
GPL10999
Series:
GSE40617
Download data: TXT
Sample
Accession:
GSM997976
ID:
300997976

SRA Run Selector

8.

Sample_A1

Organism:
Homo sapiens
Source name:
Exponentially growing
Platform:
GPL10999
Series:
GSE40617
Download data: TXT
Sample
Accession:
GSM997975
ID:
300997975

SRA Run Selector

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db=gds|term=GSE40617[Accession]|query=1|qty=2|blobid=MCID_6759580ac087e3673298b79d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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