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Items: 14

1.

A functional map of DNA-associated proteolysis

(Submitter supplied) We established an assay to localize DNA-associated proteins that are slated for degradation by the ubiquitin-proteasome system. The genome-wide map we describe here ties proteolysis to active enhancer elements and to transcription start sites of specific gene families.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL13112
12 Samples
Download data: BIGWIG
Series
Accession:
GSE33821
ID:
200033821

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8351 Series
188834 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

3.

Ubiquitin with alpha-Amanitin and Proteasome Inhibitor

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM1095383
ID:
301095383

SRA Run Selector

4.

PSMB1 with Proteasome Inhibitor

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM1095382
ID:
301095382

SRA Run Selector

5.

PSMB1

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM1095381
ID:
301095381

SRA Run Selector

6.

CREB with Proteasome Inhibitor

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM1095380
ID:
301095380

SRA Run Selector

7.

CREB

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM1095379
ID:
301095379

SRA Run Selector

8.

cJun

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM1095378
ID:
301095378

SRA Run Selector

9.

PPAR-gamma

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM1095377
ID:
301095377

SRA Run Selector

10.

input

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data
Sample
Accession:
GSM841627
ID:
300841627

SRA Run Selector

11.

Ubiq_Lacta_rep2

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM838024
ID:
300838024

SRA Run Selector

12.

Ubiq_Lacta_rep1

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM838023
ID:
300838023

SRA Run Selector

13.

Ubiq_DMSO_rep2

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM838022
ID:
300838022

SRA Run Selector

14.

Ubiq_DMSO_rep1

Organism:
Mus musculus
Source name:
3T3-L1 cells (ATCC #CL-173)
Platform:
GPL13112
Series:
GSE33821
Download data: BIGWIG
Sample
Accession:
GSM838021
ID:
300838021

SRA Run Selector

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db=gds|term=GSE33821[Accession]|query=1|qty=2|blobid=MCID_6748b8a8462e1a751e0e185f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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