GEO DataSets

(Submitter supplied) The platform contains approximately 5000 clones, consisting of the Sanger BAC clone set with an average resolution along the whole genome of 1.0 Mb (http://www.ensembl.org/Homo sapiens/cytoview), the OncoBac set (http://informa.bio.caltech.edu/Bac_onc.html), containing approximately 600 clones corresponding to 200 cancer-related genes, and selected clones of interest obtained from the Children's Hospital Oakland Research Institute (CHORI) (http://bacpac.chori.org/home.htm) to fill any gaps larger than 1 Mb on chromosome 6 and to have full-coverage contigs of regions on chromosomes 8, 11, 13, and 20 (previously described in Buffart et al J Pathol 2007).

Organism:

Homo sapiens

1 Series

61 Samples

Download data

(Submitter supplied) The platform contains approximately 5000 clones, consisting of the Sanger BAC clone set with an average resolution along the whole genome of 1.0 Mb (http://www.ensembl.org/Homo sapiens/cytoview), the OncoBac set (http://informa.bio.caltech.edu/Bac_onc.html), containing approximately 600 clones corresponding to 200 cancer-related genes, and selected clones of interest obtained from the Children's Hospital Oakland Research Institute (CHORI) (http://bacpac.chori.org/home.htm) to fill any gaps larger than 1 Mb on chromosome 6 and to have full-coverage contigs of regions on chromosomes 8, 11, 13, and 20 (previously described in Buffart et al J Pathol 2007).

Organism:

Homo sapiens

1 Series

13 Samples

Download data

(Submitter supplied) - clones were mapped to the UCSC July 2003 Freeze of the Human Golden Path (NCBI build 34) - oncobacs were mapped using their overgo-primers and are available via www.ensembl.org Protocol: as described in: Carvalho et al (J. Clin. Path.,2004, vol. 57, 644-646). DNA from the 1 Mb resolution Sanger BAC clone set, the OncoBac set, and in house clones of interest, supplemented with clones from the Children’s Hospital Oakland Research Institute (CHORI), amounting to a total of 4678 clones with known chromosomal positions, was isolated according to the CHORI protocol. more...

Organism:

Homo sapiens

2 Series

37 Samples

Download data

(Submitter supplied) - clones were mapped to the UCSC July 2003 Freeze of the Human Golden Path (NCBI build 34) - oncobacs were mapped using their overgo-primers and are available via www.ensembl.org Protocol: as described in: Carvalho et al (J. Clin. Path.,2004, vol. 57, 644-646). DNA from the 1 Mb resolution Sanger BAC clone set, the OncoBac set, and in house clones of interest, supplemented with clones from the Children’s Hospital Oakland Research Institute (CHORI), amounting to a total of 4678 clones with known chromosomal positions, was isolated according to the CHORI protocol. more...

Organism:

Homo sapiens

4 Series

104 Samples

Download data