GEO DataSets

(Submitter supplied) Chromatin immunoprecipitation was combined with high-density tiling array (ChIP-chip) and gene expression microarray to reveal the adaptive responses of Escherichia coli to phosphate starvation. The first sketch of the genome-wide distribution of PhoB binding profile was unveiled and 43 regions were identified as the PhoB binding regions. The presence of a significant common motif in these binding regions allowed us to reconstruct the PhoB binding pattern. more...

Organism:

Escherichia coli; Escherichia coli str. K-12 substr. MG1655

Type:

Genome binding/occupancy profiling by genome tiling array

Platform:

GPL10416

3 Samples

Download data: PAIR

(Submitter supplied) This is a commercial 385K high density tiling array from NimbleGen for E. coli K12 MG1655 (Cat. No. 05542901001). The design contains 50-mer probe with 24 bp median probe spacing and the control probes are also included. native array description file: 2006-07-18_Ecoli_K12_ChIP.ndf native array description file: 2006-07-18_Ecoli_K12_ChIP.pos Protocol: see manufacturer's web site www.nimblegen.com

Organism:

Escherichia coli str. K-12 substr. MG1655

4 Series

32 Samples

Download data: NDF, POS