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Items: 1 to 20 of 33

1.

HDAC1 regulates the chromatin landscape to control transcriptional dependencies in chronic lymphocytic leukemia [ChIP-seq]

(Submitter supplied) Chronic lymphocytic leukemia (CLL) is a quiescent B-cell malignancy that depends on transcriptional dysregulation for survival. The histone deacetylases are transcriptional regulators whose role within the regulatory chromatin and consequence on the CLL transcriptome is poorly characterized. Here, we profiled and integrated the genome wide occupancy of HDAC1, BRD4, H3K27Ac and H3K9Ac signals with chromatin accessibility, Pol2 occupancy and target expression signatures in CLL cells. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18573
31 Samples
Download data: BROADPEAK, NARROWPEAK
Series
Accession:
GSE216287
ID:
200216287

PubMed Full text in PMC Similar studies

2.

Illumina NextSeq 500 (Homo sapiens)

Organism:
Homo sapiens
12611 Series
343897 Samples
Download data
Platform
Accession:
GPL18573
ID:
100018573

3.

Input_pooled

Organism:
Homo sapiens
Source name:
Pooled Input
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data
Sample
Accession:
GSM6666022
ID:
306666022

SRA Run Selector

4.

Treated3_00251766_H3K27Ac

Organism:
Homo sapiens
Source name:
CLL,1766 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666021
ID:
306666021

SRA Run Selector

5.

CTRL3_00251766_H3K27Ac

Organism:
Homo sapiens
Source name:
CLL,1766 , Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666020
ID:
306666020

SRA Run Selector

6.

Treated2_00251275_H3K27Ac

Organism:
Homo sapiens
Source name:
CLL,1275 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666019
ID:
306666019

SRA Run Selector

7.

CTRL2_00251275_H3K27Ac

Organism:
Homo sapiens
Source name:
CLL,1275 A, Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666018
ID:
306666018

SRA Run Selector

8.

Treated1_00251228_H3K27Ac

Organism:
Homo sapiens
Source name:
CLL,1228 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666017
ID:
306666017

SRA Run Selector

9.

CTRL1_00251228_H3K27Ac

Organism:
Homo sapiens
Source name:
CLL,1228 , Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666016
ID:
306666016

SRA Run Selector

10.

Treated3_00251766_BRD4

Organism:
Homo sapiens
Source name:
CLL,1766 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: NARROWPEAK
Sample
Accession:
GSM6666015
ID:
306666015

SRA Run Selector

11.

CTRL3_00251766_BRD4

Organism:
Homo sapiens
Source name:
CLL,1766 , Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: NARROWPEAK
Sample
Accession:
GSM6666014
ID:
306666014

SRA Run Selector

12.

Treated2_00251275_BRD4

Organism:
Homo sapiens
Source name:
CLL,1275 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: NARROWPEAK
Sample
Accession:
GSM6666013
ID:
306666013

SRA Run Selector

13.

CTRL2_00251275_BRD4

Organism:
Homo sapiens
Source name:
CLL,1275 A, Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: NARROWPEAK
Sample
Accession:
GSM6666012
ID:
306666012

SRA Run Selector

14.

Treated1_00251228_BRD4

Organism:
Homo sapiens
Source name:
CLL,1228 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: NARROWPEAK
Sample
Accession:
GSM6666011
ID:
306666011

SRA Run Selector

15.

CTRL1_00251228_BRD4

Organism:
Homo sapiens
Source name:
CLL,1228 , Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: NARROWPEAK
Sample
Accession:
GSM6666010
ID:
306666010

SRA Run Selector

16.

Treated3_00251766_H3K9Ac

Organism:
Homo sapiens
Source name:
CLL,1766 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666009
ID:
306666009

SRA Run Selector

17.

CTRL3_00251766_H3K9Ac

Organism:
Homo sapiens
Source name:
CLL,1766 , Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666008
ID:
306666008

SRA Run Selector

18.

Treated2_00251275_H3K9Ac

Organism:
Homo sapiens
Source name:
CLL,1275 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666007
ID:
306666007

SRA Run Selector

19.

CTRL2_00251275_H3K9Ac

Organism:
Homo sapiens
Source name:
CLL,1275 A, Control
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666006
ID:
306666006

SRA Run Selector

20.

Treated1_00251228_H3K9Ac

Organism:
Homo sapiens
Source name:
CLL,1228 Abexinostat 400mM 6h
Platform:
GPL18573
Series:
GSE216287 GSE216290
Download data: BROADPEAK
Sample
Accession:
GSM6666005
ID:
306666005

SRA Run Selector

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