GSE20563[Accession] - GEO DataSets - NCBI

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Items: 8

Select item 2000205631.

Knockdown of PHF8 in HeLa S3 cells

(Submitter supplied) PHF8 is an H3K9me2 demethylase, interacts with H3K4me3 and RNA Polymerase II, is enriched at thousands of transcription start sites and can act as a transcriptional co-activator. In the following experiment we wanted to analyze the impact of PHF8-knockdown on transcript levels in HeLa cells.

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL6480
6 Samples

Download data: TXT

Series

Accession:: GSE20563

ID:: 200020563

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000064802.

Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)

(Submitter supplied) This multi-pack (4X44K) formatted microarray represents a compiled view of the human genome as it is understood today. The sequence information used to design this product was derived from a broad survey of well known sources such as RefSeq, Goldenpath, Ensembl, Unigene and others. The resulting view of the human genome covers 41K unique genes and transcripts which have been verified and optimized by alignment to the human genome assembly and by Agilent's Empirical Validation process. more...

Organism:: Homo sapiens

21 DataSets
944 Series
4 Related Platforms
24905 Samples

Platform

Accession:: GPL6480

ID:: 100006480

Select item 3005166763.

HeLa_PHF8-knockdown_dyeswap_rep3

Organism:: Homo sapiens

Source name:: HeLa, control shRNA, 3d post transfection, Rep3 (channel 1) HeLa, PHF8-shA, 3d post transfection, Rep3 (channel 2)

Platform:: GPL6480
Series:: GSE20563 GSE20753

Download data: TXT

Sample

Accession:: GSM516676

ID:: 300516676

Select item 3005166754.

HeLa_PHF8-knockdown_dyeswap_rep2

Organism:: Homo sapiens

Source name:: HeLa, control shRNA, 3d post transfection, Rep2 (channel 1) HeLa, PHF8-shA, 3d post transfection, Rep2 (channel 2)

Platform:: GPL6480
Series:: GSE20563 GSE20753

Download data: TXT

Sample

Accession:: GSM516675

ID:: 300516675

Select item 3005166745.

HeLa_PHF8-knockdown_dyeswap_rep1

Organism:: Homo sapiens

Source name:: HeLa, control shRNA, 3d post transfection, Rep1 (channel 1) HeLa, PHF8-shA, 3d post transfection, Rep1 (channel 2)

Platform:: GPL6480
Series:: GSE20563 GSE20753

Download data: TXT

Sample

Accession:: GSM516674

ID:: 300516674

Select item 3005166736.

HeLa_PHF8-knockdown_rep3

Organism:: Homo sapiens

Source name:: HeLa, PHF8-shA, 3d post transfection, Rep3 (channel 1) HeLa, control shRNA, 3d post transfection, Rep3 (channel 2)

Platform:: GPL6480
Series:: GSE20563 GSE20753

Download data: TXT

Sample

Accession:: GSM516673

ID:: 300516673

Select item 3005166727.

HeLa_PHF8-knockdown_rep2

Organism:: Homo sapiens

Source name:: HeLa, PHF8-shA, 3d post transfection, Rep2 (channel 1) HeLa, control shRNA, 3d post transfection, Rep2 (channel 2)

Platform:: GPL6480
Series:: GSE20563 GSE20753

Download data: TXT

Sample

Accession:: GSM516672

ID:: 300516672

Select item 3005166718.

HeLa_PHF8-knockdown_rep1

Organism:: Homo sapiens

Source name:: HeLa, PHF8-shA, 3d post transfection, Rep1 (channel 1) HeLa, control shRNA, 3d post transfection, Rep1 (channel 2)

Platform:: GPL6480
Series:: GSE20563 GSE20753

Download data: TXT

Sample

Accession:: GSM516671

ID:: 300516671

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