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Items: 16

1.

DNA Binding Specificities of Fkh1, Fkh2, Hcm1, and Fhl1 Revealed by SELEX-seq

(Submitter supplied) Quantifying the preferences of DNA binding proteins is an essential step in determining how transcription factors (TFs) interact with their targets in the genome. High-throughput in vitro binding assays have been used to identify the inherent DNA preferences of TFs in a controlled environment isolated from confounding factors such as genome accessibility, DNA methylation, and TF binding cooperativity. more...
Organism:
synthetic construct
Type:
Other
Platforms:
GPL19604 GPL19424
13 Samples
Download data: TAR
Series
Accession:
GSE178811
ID:
200178811

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (synthetic construct)

Organism:
synthetic construct
61 Series
5354 Samples
Download data
Platform
Accession:
GPL19604
ID:
100019604

3.

Illumina NextSeq 500 (synthetic construct)

Organism:
synthetic construct
108 Series
1081 Samples
Download data
Platform
Accession:
GPL19424
ID:
100019424

4.

Fkh2_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398243
ID:
305398243

SRA Run Selector

5.

Fkh2_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398242
ID:
305398242

SRA Run Selector

6.

Fkh1_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398241
ID:
305398241

SRA Run Selector

7.

Fkh1_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398240
ID:
305398240

SRA Run Selector

8.

Fkh1_Fkh2_R0

Organism:
synthetic construct
Source name:
in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data
Sample
Accession:
GSM5398239
ID:
305398239

SRA Run Selector

9.

Fhl1_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127498
ID:
306127498

SRA Run Selector

10.

Fhl1_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127497
ID:
306127497

SRA Run Selector

11.

Hcm1_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127496
ID:
306127496

SRA Run Selector

12.

Hcm1_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127495
ID:
306127495

SRA Run Selector

13.

Hcm1_Fhl1_R0

Organism:
synthetic construct
Source name:
in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data
Sample
Accession:
GSM6127494
ID:
306127494

SRA Run Selector

14.

Fkh1_R2_test

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398238
ID:
305398238

SRA Run Selector

15.

Fkh1_R1_test

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398237
ID:
305398237

SRA Run Selector

16.

R0_test

Organism:
synthetic construct
Source name:
in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data
Sample
Accession:
GSM5398236
ID:
305398236

SRA Run Selector

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