GEO DataSets

(Submitter supplied) Post-radiation sarcomas are rare secondary cancers arising from radiation therapies. To date, few genetic specificities have been described for such malignancies and the oncogenesis of sarcomas with complex genetics (both sporadic and post-radiation) remains largely misunderstood. We performed genomic analyses on both sporadic and post-radiation sarcomas to study their copy-number alterations. This analysis is described in Lesluyes et al. more...

Organism:

Homo sapiens

Type:

Genome variation profiling by genome tiling array; Genome variation profiling by SNP array

Platforms:

GPL6801 GPL16131

133 Samples

Download data: CEL, TSV

(Submitter supplied) #%create_date=2011-12-01 GMT-08:00 10:25:44 #%chip_type=CytoScanHD_Array #%genome-species=Homo sapiens #%genome-version=hg19 #%genome-version-ucsc=hg19 #%genome-version-ncbi=GRCh37 #%genome-version-create_date=2009-02-00 #%dbSNP_date=2010-09-23 #%dbSNP_version=132 #%dgv-date=2010-10-00 #%dgv-version=10 #%hapmap-date=2008-01-08 #%hapmap-version=23 #%netaffx-annotation-date=2011-12-01 #%netaffx-annotation-netaffx-build=32.1 #%netaffx-annotation-tabular-format-version=1.0 #%netaffx-annotation-docgen-method=com.affymetrix.database.docgen.DocGenDriver #%netaffx-annotation-docgen-version=cluster_friendly_submission #%create_date=2011-12-01 GMT-08:00 10:25:09 #%chip_type=CytoScanHD_Array #%genome-species=Homo sapiens #%genome-version=hg19 #%genome-version-ucsc=hg19 #%genome-version-ncbi=GRCh37 #%genome-version-create_date=2009-02-00 #%dbSNP_date=2010-09-23 #%dbSNP_version=132 #%dgv-date=2010-10-00 #%dgv-version=10 #%netaffx-annotation-date=2011-12-01 #%netaffx-annotation-netaffx-build=32.1 #%netaffx-annotation-tabular-format-version=1.0 #%netaffx-annotation-docgen-method=com.affymetrix.database.docgen.DocGenDriver #%netaffx-annotation-docgen-version=cluster_friendly_submission ##This database/product contains information from the Online Mendelian Inheritance in Man(R) (OMIM(R)) database, which has been obtained under a license from the Johns Hopkins University. more...

Organism:

Homo sapiens

166 Series

6926 Samples

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(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 (ucsc=hg18; ncbi=NCBI36) August 01, 2012: annotation table updated with netaffx build 32 (ucsc=hg19; ncbi=GRCh37) Protocol: see manufacturer's web site The new Affymetrix® Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. more...

Organism:

Homo sapiens

404 Series

22859 Samples

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