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Items: 1 to 20 of 28

1.

CRISPR-mediated mutagenesis of RNA editing cis-regulatory elements

(Submitter supplied) We used CRISPR KI technology to mutagenize the cis-regulatory elements including the editing stem and the editing complementary sequence of three RNA editing substrates-NEIL1, TTYH2, AJUBA. We designed single nucleotide variants, double-nucleotide variants and other mutant isoforms to interrogate the primary sequence and the secondary structures around the endogenous RNA editing sites. Gene specific primers were used to make the NGS library for each locus. more...
Organism:
Homo sapiens; synthetic construct
Type:
Other
Platforms:
GPL27609 GPL21697
25 Samples
Download data: TXT
Series
Accession:
GSE138860
ID:
200138860

SRA Run Selector

2.

NextSeq 550 (synthetic construct)

Organism:
synthetic construct
28 Series
593 Samples
Download data
Platform
Accession:
GPL27609
ID:
100027609

3.

NextSeq 550 (Homo sapiens)

Organism:
Homo sapiens
1499 Series
44577 Samples
Download data
Platform
Accession:
GPL21697
ID:
100021697

4.

cDNA of TTYH2 mutants from degenerate donor rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120540
ID:
304120540

SRA Run Selector

5.

cDNA of TTYH2 mutants from degenerate donor rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120539
ID:
304120539

SRA Run Selector

6.

cDNA of NEIL1 mutants from degenerate donor rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120538
ID:
304120538

SRA Run Selector

7.

cDNA of NEIL1 mutants from degenerate donor rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120537
ID:
304120537

SRA Run Selector

8.

cDNA of AJUBA mutants in editng stem rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120536
ID:
304120536

SRA Run Selector

9.

cDNA of AJUBA mutants in editng stem rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120535
ID:
304120535

SRA Run Selector

10.

cDNA of TTYH2 mutants in editing complementary sequence rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120534
ID:
304120534

SRA Run Selector

11.

cDNA of TTYH2 mutants in editing complementary sequence rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120533
ID:
304120533

SRA Run Selector

12.

cDNA of TTYH2 mutants in editing stem rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120532
ID:
304120532

SRA Run Selector

13.

cDNA of TTYH2 mutants in editing stem rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120531
ID:
304120531

SRA Run Selector

14.

cDNA of NEIL1 mutants from Crick strand donor knockin rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120527
ID:
304120527

SRA Run Selector

15.

cDNA of NEIL1 mutants from Crick strand donor knockin rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120526
ID:
304120526

SRA Run Selector

16.

cDNA of NEIL1 mutants from double strand donor knockin rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120525
ID:
304120525

SRA Run Selector

17.

cDNA of NEIL1 mutants from double strand donor knockin rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120524
ID:
304120524

SRA Run Selector

18.

cDNA of NEIL1 mutants from Watson strand donor knockin rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120523
ID:
304120523

SRA Run Selector

19.

cDNA of NEIL1 mutants from Watson strand donor knockin rep1

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120522
ID:
304120522

SRA Run Selector

20.

DNA of NEIL1 mutants from Crick strand donor knockin rep2

Organism:
Homo sapiens
Source name:
HEK293T cells
Platform:
GPL21697
Series:
GSE138860
Download data
Sample
Accession:
GSM4120521
ID:
304120521

SRA Run Selector

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