GSE116004[Accession] - GEO DataSets - NCBI

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Select item 2001160041.

Contribution of time of day and the circadian clock to the heat stress responsive transcriptome in Arabidopsis

(Submitter supplied) In Arabidopsis, a large subset of heat responsive genes exhibits diurnal or circadian oscillations. However, to what extent the dimension of time and/or the circadian clock contribute to heat stress responses remains largely unknown. To determine the direct contribution of time of day and/or the clock to differential heat stress responses, we probed wild-type and mutants of the circadian clock genes CCA1, LHY, PRR7, and PRR9 following exposure to heat (37°C) and moderate cold (10°C) in the early morning (ZT1) and afternoon (ZT6). more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19580
35 Samples

Download data: XLS

Series

Accession:: GSE116004

ID:: 200116004

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000195802.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:: Arabidopsis thaliana

413 Series
9434 Samples

Platform

Accession:: GPL19580

ID:: 100019580

Select item 3032048553.

prr7prr9_37C_ZT6_Rep2

Organism:: Arabidopsis thaliana

Source name:: prr7prr9_37C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204855

ID:: 303204855

SRA Run Selector

Select item 3032048544.

prr7prr9_22C_ZT6_Rep2

Organism:: Arabidopsis thaliana

Source name:: prr7prr9_22C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204854

ID:: 303204854

SRA Run Selector

Select item 3032048535.

Col-0_37C_ZT6_Rep2

Organism:: Arabidopsis thaliana

Source name:: Col-0_37C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204853

ID:: 303204853

SRA Run Selector

Select item 3032048526.

Col-0_22C_ZT6_Rep2

Organism:: Arabidopsis thaliana

Source name:: Col-0_22C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204852

ID:: 303204852

SRA Run Selector

Select item 3032048517.

prr7prr9_37C_ZT6_Rep1

Organism:: Arabidopsis thaliana

Source name:: prr7prr9_37C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204851

ID:: 303204851

SRA Run Selector

Select item 3032048508.

Col-0_37C_ZT6_Rep1

Organism:: Arabidopsis thaliana

Source name:: Col-0_37C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204850

ID:: 303204850

SRA Run Selector

Select item 3032048499.

prr7prr9_22C_ZT6_Rep1

Organism:: Arabidopsis thaliana

Source name:: prr7prr9_22C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204849

ID:: 303204849

SRA Run Selector

Select item 30320484810.

Col-0_22C_ZT6_Rep1

Organism:: Arabidopsis thaliana

Source name:: Col-0_22C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204848

ID:: 303204848

SRA Run Selector

Select item 30320484711.

prr7prr9_10C_ZT6_Rep2

Organism:: Arabidopsis thaliana

Source name:: prr7prr9_10C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204847

ID:: 303204847

SRA Run Selector

Select item 30320484612.

Col-0_10C_ZT6_Rep2

Organism:: Arabidopsis thaliana

Source name:: Col-0_10C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204846

ID:: 303204846

SRA Run Selector

Select item 30320484513.

prr7prr9_10C_ZT6_Rep1

Organism:: Arabidopsis thaliana

Source name:: prr7prr9_10C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204845

ID:: 303204845

SRA Run Selector

Select item 30320484414.

Col-0_10C_ZT6_Rep1

Organism:: Arabidopsis thaliana

Source name:: Col-0_10C_ZT6

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204844

ID:: 303204844

SRA Run Selector

Select item 30320484315.

cca1lhy_37C_ZT1_Rep4

Organism:: Arabidopsis thaliana

Source name:: cca1lhy_37C_ZT1

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204843

ID:: 303204843

SRA Run Selector

Select item 30320484216.

cca1lhy_37C_ZT1_Rep3

Organism:: Arabidopsis thaliana

Source name:: cca1lhy_37C_ZT1

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204842

ID:: 303204842

SRA Run Selector

Select item 30320484117.

cca1lhy_37C_ZT1_Rep2

Organism:: Arabidopsis thaliana

Source name:: cca1lhy_37C_ZT1

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204841

ID:: 303204841

SRA Run Selector

Select item 30320484018.

cca1lhy_37C_ZT1_Rep1

Organism:: Arabidopsis thaliana

Source name:: cca1lhy_37C_ZT1

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204840

ID:: 303204840

SRA Run Selector

Select item 30320483919.

Col-0_37C_ZT1_Rep4

Organism:: Arabidopsis thaliana

Source name:: Col-0_37C_ZT1

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204839

ID:: 303204839

SRA Run Selector

Select item 30320483820.

Col-0_37C_ZT1_Rep3

Organism:: Arabidopsis thaliana

Source name:: Col-0_37C_ZT1

Platform:: GPL19580
Series:: GSE116004

Sample

Accession:: GSM3204838

ID:: 303204838

SRA Run Selector

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