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Items: 7

1.

The cis-regulatory dynamics of embryonic development at single cell resolution

(Submitter supplied) Single cell measurements of gene expression are providing new insights into lineage commitment, yet the regulatory changes underlying individual cell trajectories remain elusive. Here, we profiled chromatin accessibility in over 20,000 single nuclei across multiple stages of Drosophila embryogenesis. Our data reveal heterogeneity in the regulatory landscape prior to gastrulation that reflects anatomical position, a feature that aligns with future cell fate. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL19132 GPL13304
4 Samples
Download data: BW, TXT
Series
Accession:
GSE101581
ID:
200101581

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina NextSeq 500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
489 Series
11757 Samples
Download data
Platform
Accession:
GPL19132
ID:
100019132

3.

Illumina HiSeq 2000 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
910 Series
18316 Samples
Download data
Platform
Accession:
GPL13304
ID:
100013304

4.

6-8hr Mef2+ Drosophila embryo nuclei DNAse-seq

Organism:
Drosophila melanogaster
Source name:
Nuclei isolated from whole embryos Mef2+
Platform:
GPL13304
Series:
GSE101581
Download data: BW
Sample
Accession:
GSM2860549
ID:
302860549

SRA Run Selector

5.

6-8hr elav+ Drosophila embryo nuclei DNAse-seq

Organism:
Drosophila melanogaster
Source name:
Nuclei isolated from whole embryos elav+
Platform:
GPL13304
Series:
GSE101581
Download data: BW
Sample
Accession:
GSM2860548
ID:
302860548

SRA Run Selector

6.

6-8hr WE Drosophila embryo nuclei DNAse-seq

Organism:
Drosophila melanogaster
Source name:
Nuclei isolated from whole embryos ('WE')
Platform:
GPL13304
Series:
GSE101581
Download data: BW
Sample
Accession:
GSM2860547
ID:
302860547

SRA Run Selector

7.

Drosophila nuclei sci-ATAC-seq

Organism:
Drosophila melanogaster
Source name:
Nuclei isolated from whole embryos
Platform:
GPL19132
Series:
GSE101581
Download data: TXT
Sample
Accession:
GSM2706365
ID:
302706365

SRA Run Selector

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db=gds|term=GSE101581[Accession]|query=1|qty=2|blobid=MCID_674c33d5d8260840384dbf9a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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