GPL6096[ACCN] AND gpl[ETYP] NOT 100006096[uid] - GEO DataSets

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 20

Select item 1000279011.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [mogene10st_Mm_ENSG, Version 23.0.0]

(Submitter supplied) Affymetrix

Organism:: Mus musculus

2 Series
1 Related Platform
10 Samples

Download data: CDF, TXT

Platform

Accession:: GPL27901

ID:: 100027901

Select item 1000241392.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [noncoder version]

(Submitter supplied) Re-annotation of exon array probes can be used to profile expressions of tens of thousands of long non-coding RNAs (lncRNAs). Chromosome coordinates based on mm9. Protocol: See manufacturer's web site

Organism:: Mus musculus

2 Series
1 Related Platform
4 Samples

Download data: MPS, PGF, XLS

Platform

Accession:: GPL24139

ID:: 100024139

Select item 1000246993.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [Ver. 22.0.0, MoEx10stv1_Mm_ENSG]

(Submitter supplied) Affymetrix

Organism:: Mus musculus

1 Series
1 Related Platform
17 Samples

Download data: CDF, TXT

Platform

Accession:: GPL24699

ID:: 100024699

Select item 1000231484.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [gene-level version]

(Submitter supplied) The probe to gene mapping file 'probeToGeneLUT.txt' is linked as supplementary file. Protocol: See manufacturer's web site

Organism:: Mus musculus

3 Series
1 Related Platform
65 Samples

Download data: TXT

Platform

Accession:: GPL23148

ID:: 100023148

Select item 1000230185.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [AltAnalyze probeset-to-Ensembl mapping]

(Submitter supplied) Ensembl build: EnsMart72 Protocol: see manufacturer's web site

Organism:: Mus musculus

1 Series
1 Related Platform
4 Samples

Download data: CLF, MPS, PGF

Platform

Accession:: GPL23018

ID:: 100023018

Select item 1000198776.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [Ensembl mouse genome build 70 using the R/BioConductor package annmap]

(Submitter supplied) Annotations and cross-mappings between probesets, exons and genes were obtained from Ensembl mouse genome build 70 using the R/BioConductor package annmap. http://annmap.cruk.manchester.ac.uk/download/#mmxmapcore Protocol: See manufacturer's web site

Organism:: Mus musculus

1 Series
1 Related Platform
6 Samples

Download data: TXT

Platform

Accession:: GPL19877

ID:: 100019877

Select item 1000179467.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [custom CDF: MoEx10stv1_Mm_ENST ver. 15]

(Submitter supplied) This is identical to GPL6096 but a custom cdf environment was used to extract data. Microarray analysis was performed using PGF file derived from the CDF file obtained from the University of Michigan CustomCDF probe-to-probeset mappings (Custom CDF, ENST, version 15). The PGF file, the Affymetrix CLF file describing the probe layout on the microarray, and the annotation file describing each probeset are linked below as supplementary files. more...

Organism:: Mus musculus

2 Series
1 Related Platform
32 Samples

Download data: PGF, TXT

Platform

Accession:: GPL17946

ID:: 100017946

Select item 1000191088.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [MoEx10stv1_Mm_REFSEQ.cdf]

(Submitter supplied) This is identical to GPL6096 but a custom MoEx10stv1_Mm_REFSEQ.cdf environment was used to extract data. Protocol: See manufacturer's web site

Organism:: Mus musculus

2 Series
1 Related Platform
12 Samples

Download data: CDF, CLF

Platform

Accession:: GPL19108

ID:: 100019108

Select item 1000155559.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [CDF: Brainarray Ver. 14.1.0, MoEx10stv1_Mm_ENSG]

(Submitter supplied) This is identical to GPL6096 but a custom cdf environment was used to extract data. Microarray analysis was performed using customCDF from Brainarray (Brainarray Version 14.1.0, MoEx10stv1_Mm_ENSG). The custom cdf is linked below as a supplementary file.

Organism:: Mus musculus

1 Series
1 Related Platform
30 Samples

Download data: CDF, TXT

Platform

Accession:: GPL15555

ID:: 100015555

Select item 10001668210.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [xmapcore Ensembl mouse version 62]

(Submitter supplied) xmapcore database for Ensembl mouse version 62 (http://annmap.picr.man.ac.uk/download/). Attached supplementary file (GPL16682_table_map_probeset_ensg.txt) is used to assign the probes that map to consensus exons, i.e. exons that are contained in the majority of transcripts. This file was generated using xmapcore. Protocol: See manufacturer's web site

Organism:: Mus musculus

1 Series
1 Related Platform
48 Samples

Download data: TXT

Platform

Accession:: GPL16682

ID:: 100016682

Select item 10001525111.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [custom CDF: moex10stv1_52_37e_0111genes.cdf], transcript(gene) version

(Submitter supplied) Probe set data extracted from custom CDF: moex10stv1_52_37e_0111genes.cdf The CDF was based on a complete re-alignment of oligonucleotide probes to the genome and transcriptome (Ensembl 52, ASTD 1.1; further information on http://bioinfo.i-med.ac.at). Protocol: See manufacturer's web site

Organism:: Mus musculus

1 Series
1 Related Platform
6 Samples

Download data: CDF

Platform

Accession:: GPL15251

ID:: 100015251

Select item 10001611612.

MoEx-1_0-st Mus musculus ENSE version 14

(Submitter supplied) On-chip photolithography

Organism:: Mus musculus

1 Series
1 Related Platform
2 Samples

Download data: CDF

Platform

Accession:: GPL16116

ID:: 100016116

Select item 10001540813.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [Alternative CDF: MBNI Entrez Gene version 11]

(Submitter supplied) This Platform is identical to GPL6096 but a custom cdf environment was used to extract data. The cdf can be found at the link below. Protocol: See manufacturer's website (www.affymetrix.com).

Organism:: Mus musculus

2 Series
1 Related Platform
12 Samples

Download data: CDF

Platform

Accession:: GPL15408

ID:: 100015408

Select item 10001436314.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [CDF: Brainarray Version 11.0.1, MoEx10stv1_Mm_ENSG]

(Submitter supplied) This is identical to GPL6096 but a custom cdf environment was used to extract data. Microarray analysis was performed using customCDF from Brainarray (Brainarray Version 11.0.1, MoEx10stv1_Mm_ENSG). The custom cdf is linked below as a supplementary file.

Organism:: Mus musculus

1 Series
1 Related Platform
8 Samples

Download data: CDF, TXT

Platform

Accession:: GPL14363

ID:: 100014363

Select item 10001461515.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [custom CDF: MoEx10stv1_Mm_ENST]

(Submitter supplied) This is identical to GPL6096 but a custom cdf environment was used to extract data. Microarray analysis was performed using PGF file derived from the CDF file obtained from the University of Michigan CustomCDF probe-to-probeset mappings (Custom CDF, ENST, version 13). The PGF file, the Affymetrix CLF file describing the probe layout on the microarray, and the annotation file describing each probeset are linked below as supplementary files. more...

Organism:: Mus musculus

2 Series
1 Related Platform
18 Samples

Download data: CLF, PGF

Platform

Accession:: GPL14615

ID:: 100014615

Select item 10001371216.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [Alternative CDF: BrainArray version 14: MoEx10stv1_Mm_ENTREZG]

(Submitter supplied) This is identical to GPL6096 but a custom cdf environment was used to extract data. The cdf can be found at the link below.

Organism:: Mus musculus

10 Series
1 Related Platform
101 Samples

Download data: CDF, TXT

Platform

Accession:: GPL13712

ID:: 100013712

Select item 10001141017.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array (MoEx-1_0-st-v1.na25.mm9.core+miRNA.SH.11023.mps)

(Submitter supplied) see manufacturer's website

Organism:: Mus musculus

1 Series
1 Related Platform
6 Samples

Download data: TXT

Platform

Accession:: GPL11410

ID:: 100011410

Select item 10000952418.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [Alternative CDF: affy10736alt]

(Submitter supplied) This is identical to GPL6096 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.

Organism:: Mus musculus

1 Series
1 Related Platform
4 Samples

Download data: CDF

Platform

Accession:: GPL9524

ID:: 100009524

Select item 10000653819.

Alternative Mouse Exon 1.0 ST Array [CDF: MmEx10stv1_Mm_REFSEQ_8]

(Submitter supplied) Custom CDF linked to this submission as a supplementary file Protocol: See manufacturer's web site

Organism:: Mus musculus

1 Series
1 Related Platform
7 Samples

Download data: CDF

Platform

Accession:: GPL6538

ID:: 100006538

Select item 10000619320.

[MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version]

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html #%create_date=Wed Mar 11 17:52:51 2009 PDT #%chip_type=MoEx-1_0-st-v1 #%lib_set_name=MoEx-1_0-st #%lib_set_version=v1 #%genome-species=Mus musculus #%genome-version=mm9 #%genome-version-ucsc=mm9 #%genome-version-ncbi=37 #%genome-version-create_date=2007-07 #%netaffx-annotation-date=2009-03-16 #%netaffx-annotation-netaffx-build=28 Protocol: See manufacturer's web site