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Items: 11

1.

Measuring the effect of deoxycholate on Bacteroides fragilis gene expression

(Submitter supplied) We used RNAseq as an approach to assess the B. fragilis strain p207 response to the bile salt, deoxycholic acid (DC). A 6min DC exposure dramatically remodeled the transcriptome with approximately 20% of transcripts exhibiting significant changes. Chaperones and efflux systems were among the most highly induced genes, while protein synthesis genes were strongly repressed by DC.
Organism:
Bacteroides fragilis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL32937
9 Samples
Download data: TXT
Series
Accession:
GSE220692
ID:
200220692

PubMed Full text in PMC Similar studies

2.

NextSeq 2000 (Bacteroides fragilis)

Organism:
Bacteroides fragilis
1 Series
9 Samples
Download data
Platform
Accession:
GPL32937
ID:
100032937

3.

B. fragilis - deoxycholate 20 min - rep 3

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809658
ID:
306809658

SRA Run Selector

4.

B. fragilis - deoxycholate 20 min - rep 2

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809657
ID:
306809657

SRA Run Selector

5.

B. fragilis - deoxycholate 20 min - rep 1

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809656
ID:
306809656

SRA Run Selector

6.

B. fragilis - deoxycholate 6 min - rep 3

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809655
ID:
306809655

SRA Run Selector

7.

B. fragilis - deoxycholate 6 min - rep 2

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809654
ID:
306809654

SRA Run Selector

8.

B. fragilis - deoxycholate 6 min - rep 1

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809653
ID:
306809653

SRA Run Selector

9.

B. fragilis - untreated - rep 3

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809652
ID:
306809652

SRA Run Selector

10.

B. fragilis - untreated - rep 2

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809651
ID:
306809651

SRA Run Selector

11.

B. fragilis - untreated - rep 1

Organism:
Bacteroides fragilis
Source name:
bacterial cell
Platform:
GPL32937
Series:
GSE220692
Download data
Sample
Accession:
GSM6809650
ID:
306809650

SRA Run Selector

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db=gds|term=GPL32937[Accession]|query=1|qty=2|blobid=MCID_676af7360bdf8a6e7317a64a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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