GPL22713[Accession] - GEO DataSets

Select item 2000906261.

Integrated analysis of mRNA and viral miRNA expression profiles in the kidney of Carassius auratus gibelio response to cyprinid herpesvirus 2

(Submitter supplied) MiRNAs are small non-coding single stranded RNAs that play crucial roles in numerous biological processes. Vertebrate herpesviruses encode multiple viral miRNAs that modulate host and viral genes. However, the roles of viral miRNAs in invertebrates have not been fully determined. Here, we used high-throughput sequencing to analyse miRNA and mRNA expression proﬁles of Carassius auratus gibelio in response to infection by cyprinid herpesvirus 2 (CyHV-2). more...

Organism:: Carassius gibelio

Type:: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing

Platform:: GPL22713
12 Samples

Download data: FASTA, XLSX

Series

Accession:: GSE90626

ID:: 200090626

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000227132.

Illumina HiSeq 2500 (Carassius gibelio)

Organism:: Carassius gibelio

1 Series
12 Samples

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Platform

Accession:: GPL22713

ID:: 100022713

Select item 3024095053.

D3_K_3_sRNA

Organism:: Carassius gibelio

Source name:: treated sample,were inoculated by intraperitoneal injection with Cyhv-2 suspended in PBS at a dose of 1 ×106 TCID50/g which was applied and verified by previous challenge experiments after seven days of acclimation, fish

Platform:: GPL22713
Series:: GSE90626

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Sample

Accession:: GSM2409505

ID:: 302409505

SRA Run Selector

Select item 3024095044.

D3_K_2_sRNA

Organism:: Carassius gibelio

Source name:: treated sample,were inoculated by intraperitoneal injection with Cyhv-2 suspended in PBS at a dose of 1 ×106 TCID50/g which was applied and verified by previous challenge experiments after seven days of acclimation, fish

Platform:: GPL22713
Series:: GSE90626

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Sample

Accession:: GSM2409504

ID:: 302409504

SRA Run Selector

Select item 3024095035.

D3_K_1_sRNA

Organism:: Carassius gibelio

Source name:: treated sample,were inoculated by intraperitoneal injection with Cyhv-2 suspended in PBS at a dose of 1 ×106 TCID50/g which was applied and verified by previous challenge experiments after seven days of acclimation, fish

Platform:: GPL22713
Series:: GSE90626

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Sample

Accession:: GSM2409503

ID:: 302409503

SRA Run Selector

Select item 3024095026.

O_K_3_sRNA

Organism:: Carassius gibelio

Source name:: control sample, were injected with PBS at the same dosage as treated sample.

Platform:: GPL22713
Series:: GSE90626

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Sample

Accession:: GSM2409502

ID:: 302409502

SRA Run Selector

Select item 3024095017.

O_K_2_sRNA

Organism:: Carassius gibelio

Source name:: control sample, were injected with PBS at the same dosage as treated sample.

Platform:: GPL22713
Series:: GSE90626

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Sample

Accession:: GSM2409501

ID:: 302409501

SRA Run Selector

Select item 3024095008.

O_K_1_sRNA

Organism:: Carassius gibelio

Source name:: control sample, were injected with PBS at the same dosage as treated sample.

Platform:: GPL22713
Series:: GSE90626

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Sample

Accession:: GSM2409500

ID:: 302409500

SRA Run Selector

Select item 3024094999.

T6_D3_K_mRNA

Organism:: Carassius gibelio

Source name:: treated sample,were inoculated by intraperitoneal injection with Cyhv-2 suspended in PBS at a dose of 1 ×106 TCID50/g which was applied and verified by previous challenge experiments after seven days of acclimation, fish

Platform:: GPL22713
Series:: GSE90626

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Sample

Accession:: GSM2409499

ID:: 302409499

SRA Run Selector

Select item 30240949810.

T5_D3_K_mRNA

Organism:: Carassius gibelio

Source name:: treated sample,were inoculated by intraperitoneal injection with Cyhv-2 suspended in PBS at a dose of 1 ×106 TCID50/g which was applied and verified by previous challenge experiments after seven days of acclimation, fish

Platform:: GPL22713
Series:: GSE90626

Download data

Sample

Accession:: GSM2409498

ID:: 302409498

SRA Run Selector

Select item 30240949711.

T4_D3_K_mRNA

Organism:: Carassius gibelio

Source name:: treated sample,were inoculated by intraperitoneal injection with Cyhv-2 suspended in PBS at a dose of 1 ×106 TCID50/g which was applied and verified by previous challenge experiments after seven days of acclimation, fish