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Items: 11

1.

Expression data from LoVo and GP5d CRC cell lines

(Submitter supplied) TF binding clusters in promoter correlate well with gene expression. We used ChIP-seq to map binding sites of the majority of highly expressed TFs in the cell. The size of clusters of TFs in the promoters of genes were found to correlate well with gene expression.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL17394
8 Samples
Download data: CEL
Series
Accession:
GSE48448
ID:
200048448

PubMed Similar studies Analyze with GEO2R

2.

[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 06, 2012: annotation table updated with netaffx build 32 June 23, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site Complete coverage of the Human Genome U133 Set plus 6,500 additional genes for analysis of over 47,000 transcripts All probe sets represented on the GeneChip Human Genome U133 Set are identically replicated on the GeneChip Human Genome U133 Plus 2.0 Array. more...
Organism:
Homo sapiens
602 DataSets
5670 Series
61 Related Platforms
175576 Samples
Download data
Platform
Accession:
GPL570
ID:
100000570

3.

[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray ENSG Version 13.0]

(Submitter supplied) see manufacturer's protocol
Organism:
Homo sapiens
1 Series
1 Related Platform
8 Samples
Download data: CDF, TXT
Platform
Accession:
GPL17394
ID:
100017394

4.

GP5d cells, biological rep 4

Organism:
Homo sapiens
Source name:
GP5d CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178969
ID:
301178969

5.

GP5d cells, biological rep 3

Organism:
Homo sapiens
Source name:
GP5d CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178968
ID:
301178968

6.

GP5d cells, biological rep 2

Organism:
Homo sapiens
Source name:
GP5d CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178967
ID:
301178967

7.

GP5d cells, biological rep 1

Organism:
Homo sapiens
Source name:
GP5d CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178966
ID:
301178966

8.

LoVo cells, biological rep 4

Organism:
Homo sapiens
Source name:
LoVo CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178965
ID:
301178965

9.

LoVo cells, biological rep 3

Organism:
Homo sapiens
Source name:
LoVo CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178964
ID:
301178964

10.

LoVo cells, biological rep 2

Organism:
Homo sapiens
Source name:
LoVo CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178963
ID:
301178963

11.

LoVo cells, biological rep 1

Organism:
Homo sapiens
Source name:
LoVo CRC cells
Platform:
GPL17394
Series:
GSE48448
Download data: CEL
Sample
Accession:
GSM1178962
ID:
301178962

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