GEO DataSets

(Submitter supplied) Structure probing combined with next-generation sequencing (NGS) has provided novel insights into RNA structure-function relationships. To date such studies have focused largely on bacteria and eukaryotes, with little attention given to the third domain of life, archaea. Furthermore, functional RNAs have not been extensively studied in archaea, leaving open questions about RNA structure and function within this domain of life. more...

Organism:

Methanosarcina acetivorans C2A

Type:

Other

Platform:

GPL33336

12 Samples

Download data: TXT

(Submitter supplied) Methylated sulfur compounds, including dimethylsulfide (DMS), methylmercaptopropionic acid (MMPA) and methylsulfide (MeSH), are well-documented to play roles in global sulfur cycle and climate homeostasis, yet the molecular mechanisms of how they are metabolized by methanogens remain largely uncharacterized. Here, using high-throughtput sequencing of RNA (RNA-seq), we gained insight into how methanogens respond to methylated sulfur compounds at the transcriptional level.

Organism:

Methanosarcina acetivorans C2A

Type:

Expression profiling by high throughput sequencing

Platform:

GPL19569

15 Samples

Download data: XLSX