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Operon complexity in Rhodobacter capsulatus revealed by integration of dRNA-seq and RNA-seq data

(Submitter supplied) We report a complex operon architecture for R. capsulatus: operons with multiple TSSs and TTSs, genomic regions of high transcriptional activity and novel transcripts. In addition, we present a new 5' and 3' targeted sequencing method for the Ion Torrent PGM. TEX+ and TEX- indicates if the dRNA-seq library was treated with Terminator 5'-Phosphate-Dependent Exonuclease or not. Treatment with TEX degrades every RNA that does not have a 5'-PPP.
Organism:
Rhodobacter capsulatus DE442; Rhodobacter capsulatus SB 1003
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL25365 GPL25364
18 Samples
Download data: BED
Series
Accession:
GSE117537
ID:
200117537

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