Search Summary
Search Criteria
Genotype Selection - Genes
84249
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Search Results
Association Results | 1 - 3 of 3 | Searched by gene IDs retrieved from gene search. |
Genes | 1 - 1 of 1 | Searched by gene names and/or gene IDs. |
SNPs | 1 - 50 of 39425 | Searched by gene symbols retrieved from gene search. |
eQTL Data | 1 - 45 of 45 | Searched by gene IDs retrieved from gene search. |
dbGaP Studies | Retrieving... | Searched by traits retrieved from association results. |
Genome View | Retrieving... |
Search Criteria
Select broad trait category to limit the items shown in the trait selection.
Select trait for search. Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.
Celiac Disease
Gene Search: CDKAL1
Location: MHC region
Genes
# | Symbol | Description | Location | OMIM | ||||||
---|---|---|---|---|---|---|---|---|---|---|
1 | PSD2 | pleckstrin and Sec7 domain containing 2 | 5 | : 139,742,475 - 139,844,466 | 620656 | |||||
| ||||||||||
Association Results
# |
Trait |
rs # |
Context |
Gene |
Location |
P-value |
Source |
Study |
Population | PubMed |
|
---|---|---|---|---|---|---|---|---|---|---|---|
1 | Schizophrenia | rs35123781 | intergenic | CXXC5, PSD2 | 5 | : 139,685,595 | 4.000 x 10-6 | NHGRI | Arab | 26198764 | |
2 | Body Mass Index | rs13174863 | intergenic | CXXC5, PSD2 | 5 | : 139,701,160 | 5.000 x 10-6 | NHGRI | South Asian Oceania Asian African European African American Hispanic |
25673413 | |
3 | Warfarin | rs356430 | intergenic | CXXC5, PSD2 | 5 | : 139,692,703 | 5.873 x 10-5 | dbGaP | phs000708 | African American |
SNPs
eQTL Data
1 - 45 of 45
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{ "section": "eqtl", "summary": "1 - 45 of 45"}