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Genotype Selection - Genes

54848
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Association Results 1 - 50 of 61 Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 50225 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 36 of 36 Searched by gene IDs retrieved from gene search.
dbGaP Studies  Retrieving... Searched by traits retrieved from page 1 of association results.
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Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
ARHGEF38Rho guanine nucleotide exchange factor 38 4 : 105,552,620 - 105,682,566619919
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["4", 105552620, 105682566] ], "markers": { "4": [ ["ARHGEF38", "NC_000004.12", 105552620, 105682566, "Rho guanine nucleotide exchange factor 38", "", 54848] ] }, "unmapped": [ ] } }

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Summary
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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Get information.Association Results

1 - 50 of 61 < Previous Next >  Page  GoDownload Modify Search
#
  Trait  
rs #
  Context  
  Gene  
  Location  
  P-value  
  Source  
  Study  
Population
  PubMed  
1 Respiratory Function Tests rs17036076 cds-synon ARHGEF38 4 : 105,654,112 6.273 x 10-14 dbGaP phs000930 European 23284291
2 Respiratory Function Tests rs17036090 intron ARHGEF38 4 : 105,672,417 6.453 x 10-14 dbGaP phs000930 European 23284291
3 Respiratory Function Tests rs17036076 cds-synon ARHGEF38 4 : 105,654,112 6.630 x 10-14 dbGaP phs000930 European 23284291
4 Respiratory Function Tests rs17036090 intron ARHGEF38 4 : 105,672,417 8.543 x 10-14 dbGaP phs000930 European 23284291
5 Respiratory Function Tests rs17035960 intron ARHGEF38 4 : 105,610,689 5.222 x 10-13 dbGaP phs000930 European 23284291
6 Respiratory Function Tests rs11735213 intron ARHGEF38 4 : 105,606,351 9.348 x 10-13 dbGaP phs000930 European 23284291
7 Respiratory Function Tests rs17035917 intron ARHGEF38 4 : 105,599,585 1.214 x 10-12 dbGaP phs000930 European 23284291
8 Respiratory Function Tests rs17035960 intron ARHGEF38 4 : 105,610,689 1.253 x 10-12 dbGaP phs000930 European 23284291
9 Respiratory Function Tests rs1374531 intron ARHGEF38 4 : 105,602,775 1.715 x 10-12 dbGaP phs000930 European 23284291
10 Respiratory Function Tests rs11735213 intron ARHGEF38 4 : 105,606,351 1.836 x 10-12 dbGaP phs000930 European 23284291
11 Respiratory Function Tests rs17035917 intron ARHGEF38 4 : 105,599,585 2.088 x 10-12 dbGaP phs000930 European 23284291
12 Respiratory Function Tests rs11725523 intron ARHGEF38 4 : 105,596,709 2.265 x 10-12 dbGaP phs000930 European 23284291
13 Respiratory Function Tests rs17036052 intron ARHGEF38 4 : 105,642,222 2.681 x 10-12 dbGaP phs000930 European 23284291
14 Respiratory Function Tests rs1374531 intron ARHGEF38 4 : 105,602,775 3.152 x 10-12 dbGaP phs000930 European 23284291
15 Respiratory Function Tests rs11725523 intron ARHGEF38 4 : 105,596,709 4.126 x 10-12 dbGaP phs000930 European 23284291
16 Respiratory Function Tests rs17036052 intron ARHGEF38 4 : 105,642,222 6.951 x 10-12 dbGaP phs000930 European 23284291
17 Respiratory Function Tests rs17036090 intron ARHGEF38 4 : 105,672,417 1.041 x 10-11 dbGaP phs000930 European 21946350
18 Respiratory Function Tests rs199332 intron ARHGEF38 4 : 105,587,369 2.086 x 10-11 dbGaP phs000930 European 23284291
19 Respiratory Function Tests rs11735213 intron ARHGEF38 4 : 105,606,351 7.292 x 10-11 dbGaP phs000930 European 21946350
20 Respiratory Function Tests rs17036052 intron ARHGEF38 4 : 105,642,222 1.074 x 10-10 dbGaP phs000930 European 21946350
21 Respiratory Function Tests rs17035917 intron ARHGEF38 4 : 105,599,585 1.104 x 10-10 dbGaP phs000930 European 21946350
22 Echocardiography rs2903392 intron ARHGEF38 4 : 105,567,593 1.253 x 10-10 dbGaP phs000342 European 17903301
23 Pulmonary Disease, Chronic Obstructive rs17035917 intron ARHGEF38 4 : 105,599,585 3.000 x 10-10 NHGRI East Asian
African
European
African American
Hispanic
28166215
24 Respiratory Function Tests rs17036052 intron ARHGEF38 4 : 105,642,222 6.073 x 10-10 dbGaP phs000930 European 20010835
25 Respiratory Function Tests rs17035960 intron ARHGEF38 4 : 105,610,689 3.869 x 10-9 dbGaP phs000930 European 20010835
26 Respiratory Function Tests rs11735213 intron ARHGEF38 4 : 105,606,351 4.363 x 10-9 dbGaP phs000930 European 20010835
27 Respiratory Function Tests rs11725523 intron ARHGEF38 4 : 105,596,709 6.356 x 10-9 dbGaP phs000930 European 20010835
28 Respiratory Function Tests rs17035917 intron ARHGEF38 4 : 105,599,585 6.705 x 10-9 dbGaP phs000930 European 20010835
29 Respiratory Function Tests rs1374531 intron ARHGEF38 4 : 105,602,775 6.886 x 10-9 dbGaP phs000930 European 20010835
30 Respiratory Function Tests rs17036076 cds-synon ARHGEF38 4 : 105,654,112 7.431 x 10-9 dbGaP phs000930 European 20010835
31 Respiratory Function Tests rs17036090 intron ARHGEF38 4 : 105,672,417 1.111 x 10-8 dbGaP phs000930 European 21946350
32 Respiratory Function Tests rs17036090 intron ARHGEF38 4 : 105,672,417 1.368 x 10-8 dbGaP phs000930 European 20010835
33 Antipsychotic Agents rs7669317 intergenic ATP5EP1, ARHGEF38 4 : 105,536,173 8.000 x 10-8 NHGRI African
European
African American
19875103
34 Respiratory Function Tests rs17036052 intron ARHGEF38 4 : 105,642,222 9.796 x 10-8 dbGaP phs000930 European 20010835
35 Forced Expiratory Volume rs1982346 intron ARHGEF38 4 : 105,657,597 1.000 x 10-7 NHGRI African
European
African American
24023788
36 Respiratory Function Tests rs17036076 cds-synon ARHGEF38 4 : 105,654,112 1.692 x 10-7 dbGaP phs000930 European 20010835
37 Respiratory Function Tests rs10023798 intron ARHGEF38 4 : 105,626,634 2.166 x 10-7 dbGaP phs000930 European 20010835
38 Respiratory Function Tests rs199332 intron ARHGEF38 4 : 105,587,369 2.254 x 10-7 dbGaP phs000930 European 20010835
39 Respiratory Function Tests rs6833345 intron ARHGEF38 4 : 105,620,009 2.274 x 10-7 dbGaP phs000930 European 20010835
40 Respiratory Function Tests rs1447097 intron ARHGEF38 4 : 105,607,476 2.617 x 10-7 dbGaP phs000930 European 20010835
41 Respiratory Function Tests rs17036090 intron ARHGEF38 4 : 105,672,417 2.639 x 10-7 dbGaP phs000930 European 20010835
42 Respiratory Function Tests rs11725523 intron ARHGEF38 4 : 105,596,709 2.806 x 10-7 dbGaP phs000930 European 20010835
43 Respiratory Function Tests rs17035917 intron ARHGEF38 4 : 105,599,585 3.446 x 10-7 dbGaP phs000930 European 20010835
44 Respiratory Function Tests rs11735213 intron ARHGEF38 4 : 105,606,351 3.466 x 10-7 dbGaP phs000930 European 20010835
45 Respiratory Function Tests rs1374531 intron ARHGEF38 4 : 105,602,775 3.646 x 10-7 dbGaP phs000930 European 20010835
46 Respiratory Function Tests rs17035960 intron ARHGEF38 4 : 105,610,689 4.012 x 10-7 dbGaP phs000930 European 20010835
47 Platelet Function Tests rs13147012 missense ARHGEF38 4 : 105,659,183 1.896 x 10-6 dbGaP phs000375 European
48 Bronchodilator Agents rs1374531 intron ARHGEF38 4 : 105,602,775 2.000 x 10-6 NHGRI European 26634245
49 Lung Volume Measurements rs1374531 intron ARHGEF38 4 : 105,602,775 2.000 x 10-6 NHGRI European 26634245
50 Surveys and Questionnaires rs11730243 intergenic ATP5EP1, ARHGEF38 4 : 105,542,556 2.000 x 10-6 NHGRI European 22566634
{ "section": "assoc", "summary": "1 - 50 of 61", "mesh": [ "Antipsychotic Agents", "Bronchodilator Agents", "Echocardiography", "Forced Expiratory Volume", "Lung Volume Measurements", "Platelet Function Tests", "Pulmonary Disease, Chronic Obstructive", "Respiratory Function Tests", "Surveys and Questionnaires" ], "genes": [23744, 54848], "snps": [199332, 1374531, 1447097, 1982346, 2903392, 6833345, 7669317, 10023798, 11725523, 11730243, 11735213, 13147012, 17035917, 17035960, 17036052, 17036076, 17036090], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 61 }

Get information.SNPs

1 - 50 of 50225 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2149174793 4 : 105,682,871 genic_downstream_transcript_variant, 500B_downstream_variant, synonymous_variant, coding_sequence_variant, downstream_transcript_variant ARHGEF38, INTS12 n/a
2 rs2149174696 4 : 105,682,795 genic_downstream_transcript_variant, 500B_downstream_variant, coding_sequence_variant, downstream_transcript_variant, missense_variant ARHGEF38, INTS12 Yes
3 rs2149174357 4 : 105,682,293 500B_downstream_variant, genic_downstream_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38, INTS12 Yes
4 rs2149174339 4 : 105,682,278 500B_downstream_variant, genic_downstream_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38, INTS12 Yes
5 rs2149174182 4 : 105,681,972 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 n/a
6 rs2149174175 4 : 105,681,943 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 Yes
7 rs2149174163 4 : 105,681,912 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 Yes
8 rs2149174112 4 : 105,681,812 genic_downstream_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 Yes
9 rs2149173910 4 : 105,681,444 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant ARHGEF38 n/a
10 rs2149173846 4 : 105,681,318 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 Yes
11 rs2149173819 4 : 105,681,272 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 Yes
12 rs2149173785 4 : 105,681,215 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 n/a
13 rs2149173772 4 : 105,681,189 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 n/a
14 rs2149173755 4 : 105,681,171 genic_downstream_transcript_variant, non_coding_transcript_variant, intron_variant, downstream_transcript_variant ARHGEF38 Yes
15 rs2149173599 4 : 105,680,901 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
16 rs2149173550 4 : 105,680,849 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
17 rs2149173460 4 : 105,680,756 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
18 rs2149173428 4 : 105,680,718 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
19 rs2149173408 4 : 105,680,710 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
20 rs2149173352 4 : 105,680,654 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
21 rs2149173235 4 : 105,680,480 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
22 rs2149173223 4 : 105,680,470 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
23 rs2149173112 4 : 105,680,335 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
24 rs2149173076 4 : 105,680,287 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
25 rs2149172994 4 : 105,680,153 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
26 rs2149172963 4 : 105,680,088 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
27 rs2149172957 4 : 105,680,080 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
28 rs2149172864 4 : 105,679,930 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
29 rs2149172857 4 : 105,679,906 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
30 rs2149172830 4 : 105,679,873 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
31 rs2149172819 4 : 105,679,861 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
32 rs2149172784 4 : 105,679,799 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
33 rs2149172776 4 : 105,679,783 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
34 rs2149172731 4 : 105,679,731 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
35 rs2149172718 4 : 105,679,714 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
36 rs2149172346 4 : 105,679,168 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
37 rs2149172330 4 : 105,679,151 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
38 rs2149172320 4 : 105,679,142 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
39 rs2149172309 4 : 105,679,136 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
40 rs2149172263 4 : 105,679,069 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
41 rs2149172237 4 : 105,679,035 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
42 rs2149172232 4 : 105,679,030 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
43 rs2149172107 4 : 105,678,823 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
44 rs2149171935 4 : 105,678,631 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
45 rs2149171931 4 : 105,678,612 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
46 rs2149171883 4 : 105,678,540 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
47 rs2149171786 4 : 105,678,376 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 n/a
48 rs2149171726 4 : 105,678,297 3_prime_UTR_variant, genic_downstream_transcript_variant, intron_variant ARHGEF38 Yes
49 rs2149171649 4 : 105,678,214 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant ARHGEF38 n/a
50 rs2149171647 4 : 105,678,205 3_prime_UTR_variant, genic_downstream_transcript_variant, non_coding_transcript_variant ARHGEF38 Yes
{ "section": "SNP", "summary": "1 - 50 of 50225", "genes": [], "retstart": 0, "pageSize": 50, "count": 50225, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gap572635.kquees.asia80gapphegenihttps://572635.kquees.asia/gaphttps://572635.kquees.asiahttps://572635.kquees.asia/gap/phegeni/gaphttps://572635.kquees.asia/gap/phegeni/phegenitrueCE888BD577EACDA1_2320SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap15054848 GA1.1.1694015884.1736355015GS1.1.1736355015.1.1.1736355029.0.0.0GS1.1.1736355014.1.1.1736355029.0.0.0N4IgDgTgpgbg mAFgSwCYgFwgMIFEAchAQgCICsA7BbgGwCMJAnHQAxvvvNsUCCuAdAFs4NEAF8gA===
1 - 36 of 36 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
1Population genomics of human gene expression101145-21017873874HapMap_v21GSE6536
40FHS_eQTL35517571480130562228122634phs000342phs000363
41FHS_eGene_leadQTLs1011562228122634phs000342phs000363
42A cross-platform analysis of 14,177 expression quantitative trait loci derived from lymphoblastoid cell lines404195023345460EGAS00000000137E-MTAB-1428,
E-MTAB-1425
46GTEx_Adipose_Subcutaneous202237023715323phs000424.v6phs000424.v6
47GTEx_Adipose_Visceral_Omentum101123423715323phs000424.v6phs000424.v6
48GTEx_Adrenal_Gland101115923715323phs000424.v6phs000424.v6
49GTEx_Artery_Aorta101124723715323phs000424.v6phs000424.v6
50GTEx_Artery_Coronary101114123715323phs000424.v6phs000424.v6
51GTEx_Artery_Tibial202236023715323phs000424.v6phs000424.v6
54GTEx_Brain_Cerebellar_Hemisphere101111423715323phs000424.v6phs000424.v6
58GTEx_Brain_Hippocampus101110223715323phs000424.v6phs000424.v6
59GTEx_Brain_Hypothalamus202210323715323phs000424.v6phs000424.v6
60GTEx_Brain_Nucleus_accumbens_basal_ganglia101112423715323phs000424.v6phs000424.v6
62GTEx_Breast_Mammary_Tissue202221923715323phs000424.v6phs000424.v6
65GTEx_Colon_Sigmoid101117323715323phs000424.v6phs000424.v6
66GTEx_Colon_Transverse101120723715323phs000424.v6phs000424.v6
68GTEx_Esophagus_Mucosa303332923715323phs000424.v6phs000424.v6
69GTEx_Esophagus_Muscularis101128123715323phs000424.v6phs000424.v6
71GTEx_Heart_Left_Ventricle202224823715323phs000424.v6phs000424.v6
72GTEx_Liver202213823715323phs000424.v6phs000424.v6
73GTEx_Lung202233823715323phs000424.v6phs000424.v6
74GTEx_Muscle_Skeletal202245423715323phs000424.v6phs000424.v6
75GTEx_Nerve_Tibial101133323715323phs000424.v6phs000424.v6
77GTEx_Pancreas302319423715323phs000424.v6phs000424.v6
78GTEx_Pituitary404412423715323phs000424.v6phs000424.v6
79GTEx_Prostate202212023715323phs000424.v6phs000424.v6
80GTEx_Skin_Not_Sun_Exposed_Suprapubic303326923715323phs000424.v6phs000424.v6
81GTEx_Skin_Sun_Exposed_Lower_leg404438823715323phs000424.v6phs000424.v6
82GTEx_Small_Intestine_Terminal_Ileum202210523715323phs000424.v6phs000424.v6
83GTEx_Spleen101111923715323phs000424.v6phs000424.v6
84GTEx_Stomach202220223715323phs000424.v6phs000424.v6
85GTEx_Testis202219923715323phs000424.v6phs000424.v6
86GTEx_Thyroid101134723715323phs000424.v6phs000424.v6
88GTEx_Vagina10119823715323phs000424.v6phs000424.v6
89GTEx_Whole_Blood201243023715323phs000424.v6phs000424.v6
{ "section": "eqtl", "summary": "1 - 36 of 36"}
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