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Genotype Selection - Genes

406997
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Association Results No data found. Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 907 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 2 of 2 Searched by gene IDs retrieved from gene search.
dbGaP Studies No data found.Searched by traits retrieved from page 1 of association results.
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Select broad trait category to limit the items shown in the trait selection.
Select trait for search.  Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
MIR215microRNA 215 1 : 220,117,962 - 220,117,853610943
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["1", 220117853, 220117962] ], "markers": { "1": [ ["MIR215", "NC_000001.11", 220117853, 220117962, "microRNA 215", "MIRN215, miRNA215, mir-215", 406997] ] }, "unmapped": [ ] } }

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Summary
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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Get information.Association Results

No association data found.
Modify Search { "section": "assoc", "summary": "No data found.", "mesh": [ ], "genes": [], "snps": [], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 0 }

Get information.SNPs

1 - 50 of 907 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2102828817 1 : 220,119,865 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
2 rs2102828813 1 : 220,119,863 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
3 rs2102828810 1 : 220,119,860 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
4 rs2102828762 1 : 220,119,779 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
5 rs2102828717 1 : 220,119,681 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
6 rs2102828583 1 : 220,119,440 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
7 rs2102828529 1 : 220,119,354 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
8 rs2102828526 1 : 220,119,352 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
9 rs2102828511 1 : 220,119,320 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
10 rs2102828494 1 : 220,119,296 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
11 rs2102828379 1 : 220,119,117 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
12 rs2102828370 1 : 220,119,106 intron_variant, upstream_transcript_variant, 2KB_upstream_variant, non_coding_transcript_variant IARS2, MIR194-1, MIR215, LOC1... Yes
13 rs2102828365 1 : 220,119,095 intron_variant, upstream_transcript_variant, 2KB_upstream_variant, non_coding_transcript_variant IARS2, MIR194-1, MIR215, LOC1... Yes
14 rs2102828363 1 : 220,119,093 intron_variant, upstream_transcript_variant, 2KB_upstream_variant, non_coding_transcript_variant IARS2, MIR194-1, MIR215, LOC1... Yes
15 rs2102828358 1 : 220,119,091 intron_variant, upstream_transcript_variant, 2KB_upstream_variant, non_coding_transcript_variant IARS2, MIR194-1, MIR215, LOC1... Yes
16 rs2102828318 1 : 220,119,053 intron_variant, upstream_transcript_variant, 2KB_upstream_variant, non_coding_transcript_variant IARS2, MIR194-1, MIR215, LOC1... Yes
17 rs2102828255 1 : 220,118,933 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
18 rs2102828241 1 : 220,118,921 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
19 rs2102828221 1 : 220,118,901 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
20 rs2102828174 1 : 220,118,825 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
21 rs2102828106 1 : 220,118,732 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
22 rs2102828099 1 : 220,118,711 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
23 rs2102828082 1 : 220,118,688 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
24 rs2102828000 1 : 220,118,548 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
25 rs2102827986 1 : 220,118,536 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
26 rs2102827970 1 : 220,118,513 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
27 rs2102827960 1 : 220,118,476 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
28 rs2102827947 1 : 220,118,436 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
29 rs2102827902 1 : 220,118,362 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
30 rs2102827866 1 : 220,118,313 intron_variant, upstream_transcript_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
31 rs2102827760 1 : 220,118,170 intron_variant, upstream_transcript_variant, 2KB_upstream_variant, non_coding_transcript_variant IARS2, MIR194-1, MIR215, LOC1... Yes
32 rs2102827656 1 : 220,118,040 intron_variant, downstream_transcript_variant, upstream_transcript_variant, 2KB_upstream_variant, 500B_downstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
33 rs2102827581 1 : 220,117,942 intron_variant, downstream_transcript_variant, non_coding_transcript_variant, 500B_downstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
34 rs2102827501 1 : 220,117,826 intron_variant, downstream_transcript_variant, non_coding_transcript_variant, 500B_downstream_variant IARS2, MIR194-1, MIR215, LOC1... n/a
35 rs2102827378 1 : 220,117,623 intron_variant, downstream_transcript_variant, 500B_downstream_variant IARS2, MIR215, LOC124904515 n/a
36 rs2102827353 1 : 220,117,589 intron_variant, downstream_transcript_variant, 500B_downstream_variant IARS2, MIR215, LOC124904515 n/a
37 rs2102827249 1 : 220,117,459 intron_variant, downstream_transcript_variant, 500B_downstream_variant IARS2, MIR215, LOC124904515 n/a
38 rs2102827192 1 : 220,117,399 intron_variant, downstream_transcript_variant, 500B_downstream_variant IARS2, MIR215, LOC124904515 Yes
39 rs1657004127 1 : 220,119,958 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
40 rs1657004083 1 : 220,119,955 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
41 rs1657004010 1 : 220,119,953 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
42 rs1657003963 1 : 220,119,950 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
43 rs1657003615 1 : 220,119,934 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
44 rs1657003465 1 : 220,119,917 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
45 rs1657003353 1 : 220,119,907 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
46 rs1657003296 1 : 220,119,904 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
47 rs1657003231 1 : 220,119,902 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
48 rs1657002978 1 : 220,119,895 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
49 rs1657002519 1 : 220,119,869 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
50 rs1657002459 1 : 220,119,855 upstream_transcript_variant, intron_variant, 2KB_upstream_variant IARS2, MIR194-1, MIR215, LOC1... Yes
{ "section": "SNP", "summary": "1 - 50 of 907", "genes": [], "retstart": 0, "pageSize": 50, "count": 907, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gap572635.kquees.asia80gapphegenihttps://572635.kquees.asia/gaphttps://572635.kquees.asiahttps://572635.kquees.asia/gap/phegeni/gaphttps://572635.kquees.asia/gap/phegeni/phegenitrueCE8B95F9767AE031_0319SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap150406997 GA1.1.818685709.1734847998GS1.1.1734847998.1.0.1734847998.0.0.0GS1.1.1734847997.1.0.1734847997.0.0.0N4IgDgTgpgbg mAFgSwCYgFwgMIFEAcAQgJwCsAYsQOwBsVAggIwAMhLzHnHjAzOc40a4AdAFs4NEAF8gA==
1 - 2 of 2 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
40FHS_eQTL4526562228122634phs000342phs000363
85GTEx_Testis101119923715323phs000424.v6phs000424.v6
{ "section": "eqtl", "summary": "1 - 2 of 2"}

Get information.dbGaP Studies

No dbGaP study data found.
Modify Search { "section": "GAP", "summary": "No data found.", "retstart": 0, "pageSize": 50, "count": "" }
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