Search Summary
Search Criteria
Genotype Selection - Genes
101928817
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Search Results
Association Results | 1 - 3 of 3 | Searched by gene IDs retrieved from gene search. |
Genes | 1 - 1 of 1 | Searched by gene names and/or gene IDs. |
SNPs | 1 - 50 of 9610 | Searched by gene symbols retrieved from gene search. |
eQTL Data | 1 - 4 of 4 | Searched by gene IDs retrieved from gene search. |
dbGaP Studies | Retrieving... | Searched by traits retrieved from association results. |
Genome View | Retrieving... |
Search Criteria
Select broad trait category to limit the items shown in the trait selection.
Select trait for search. Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.
Celiac Disease
Gene Search: CDKAL1
Location: MHC region
Genes
# | Symbol | Description | Location | OMIM | ||||||
---|---|---|---|---|---|---|---|---|---|---|
1 | LOC101928817 | uncharacterized LOC101928817 | 14 | : 89,350,287 - 89,365,008 | ||||||
| ||||||||||
Association Results
# |
Trait |
rs # |
Context |
Gene |
Location |
P-value |
Source |
Study |
Population | PubMed |
|
---|---|---|---|---|---|---|---|---|---|---|---|
1 | Personality | rs2241122 | intron | LOC101928817 | 14 | : 89,358,472 | 4.003 x 10-7 | dbGaP | phs000338 | European | |
2 | Body Height | rs7158631 | intron | LOC101928817 | 14 | : 89,353,536 | 6.406 x 10-5 | dbGaP | phs000221 | European | |
3 | Respiratory Function Tests | rs7158631 | intron | LOC101928817 | 14 | : 89,353,536 | 7.131 x 10-5 | dbGaP | phs000221 | European |
SNPs
eQTL Data
1 - 4 of 4
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Study | Result count | External references | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
⇩ | ID | Name | cis | trans | Markers | Probes | Subjects | PubMed ID | Ind. genotypes | Mol. phenotypes |
⇩ | 40 | FHS_eQTL | 7 | 20 | 10 | 15 | 5622 | 28122634 | phs000342 | phs000363 |
⇩ | 49 | GTEx_Artery_Aorta | 1 | 0 | 1 | 1 | 247 | 23715323 | phs000424.v6 | phs000424.v6 |
⇩ | 53 | GTEx_Brain_Caudate_basal_ganglia | 1 | 0 | 1 | 1 | 133 | 23715323 | phs000424.v6 | phs000424.v6 |
⇩ | 82 | GTEx_Small_Intestine_Terminal_Ileum | 1 | 0 | 1 | 1 | 105 | 23715323 | phs000424.v6 | phs000424.v6 |