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Genotype Selection - Genes

101928571
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Association Results No data found. Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 5478 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 22 of 22 Searched by gene IDs retrieved from gene search.
dbGaP Studies No data found.Searched by traits retrieved from page 1 of association results.
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Select broad trait category to limit the items shown in the trait selection.
Select trait for search.  Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
ZNF649-AS1ZNF649 antisense RNA 1 19 : 51,888,025 - 51,900,464
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["19", 51888025, 51900464] ], "markers": { "19": [ ["ZNF649-AS1", "NC_000019.10", 51888025, 51900464, "ZNF649 antisense RNA 1", "", 101928571] ] }, "unmapped": [ ] } }

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Summary
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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No data found.

Get information.Association Results

No association data found.
Modify Search { "section": "assoc", "summary": "No data found.", "mesh": [ ], "genes": [], "snps": [], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 0 }

Get information.SNPs

1 - 50 of 5478 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2122772317 19 : 51,900,937 genic_upstream_transcript_variant, 500B_downstream_variant, downstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
2 rs2122772251 19 : 51,900,911 genic_upstream_transcript_variant, 500B_downstream_variant, downstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
3 rs2122772040 19 : 51,900,745 genic_upstream_transcript_variant, 500B_downstream_variant, downstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
4 rs2122771941 19 : 51,900,645 genic_upstream_transcript_variant, 500B_downstream_variant, downstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
5 rs2122771903 19 : 51,900,605 genic_upstream_transcript_variant, 500B_downstream_variant, downstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
6 rs2122771739 19 : 51,900,481 genic_upstream_transcript_variant, 500B_downstream_variant, downstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
7 rs2122771607 19 : 51,900,345 genic_upstream_transcript_variant, non_coding_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
8 rs2122771466 19 : 51,900,224 5_prime_UTR_variant, non_coding_transcript_variant, genic_upstream_transcript_variant ZNF649, ZNF649-AS1 Yes
9 rs2122771397 19 : 51,900,183 5_prime_UTR_variant, non_coding_transcript_variant, genic_upstream_transcript_variant ZNF649, ZNF649-AS1 n/a
10 rs2122771240 19 : 51,900,087 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
11 rs2122771207 19 : 51,900,081 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
12 rs2122771163 19 : 51,900,047 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
13 rs2122771132 19 : 51,900,018 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
14 rs2122771105 19 : 51,900,006 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
15 rs2122771053 19 : 51,899,962 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
16 rs2122771022 19 : 51,899,931 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
17 rs2122770950 19 : 51,899,885 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
18 rs2122770492 19 : 51,899,557 genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
19 rs2122770319 19 : 51,899,413 genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
20 rs2122770181 19 : 51,899,327 genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
21 rs2122770054 19 : 51,899,231 genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
22 rs2122769781 19 : 51,898,999 genic_upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
23 rs2122769628 19 : 51,898,928 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
24 rs2122769563 19 : 51,898,891 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
25 rs2122769407 19 : 51,898,795 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
26 rs2122769134 19 : 51,898,639 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
27 rs2122768889 19 : 51,898,510 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
28 rs2122768748 19 : 51,898,420 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
29 rs2122768648 19 : 51,898,339 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
30 rs2122768588 19 : 51,898,298 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
31 rs2122768362 19 : 51,898,153 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
32 rs2122768338 19 : 51,898,136 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
33 rs2122768217 19 : 51,898,111 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
34 rs2122768205 19 : 51,898,110 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
35 rs2122768100 19 : 51,898,092 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
36 rs2122768066 19 : 51,898,083 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
37 rs2122767965 19 : 51,898,017 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
38 rs2122767888 19 : 51,897,943 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
39 rs2122767867 19 : 51,897,934 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
40 rs2122767822 19 : 51,897,912 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
41 rs2122767804 19 : 51,897,903 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
42 rs2122767759 19 : 51,897,888 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
43 rs2122767754 19 : 51,897,887 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
44 rs2122767649 19 : 51,897,832 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
45 rs2122767050 19 : 51,897,475 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
46 rs2122767017 19 : 51,897,456 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
47 rs2122766966 19 : 51,897,426 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
48 rs2122766785 19 : 51,897,326 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
49 rs2122766767 19 : 51,897,303 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 Yes
50 rs2122766747 19 : 51,897,297 genic_upstream_transcript_variant, upstream_transcript_variant, intron_variant ZNF649, ZNF649-AS1 n/a
{ "section": "SNP", "summary": "1 - 50 of 5478", "genes": [], "retstart": 0, "pageSize": 50, "count": 5478, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gap572635.kquees.asia80gapphegenihttps://572635.kquees.asia/gaphttps://572635.kquees.asiahttps://572635.kquees.asia/gap/phegeni/gaphttps://572635.kquees.asia/gap/phegeni/phegenitrueCE8A131675F26031_2008SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap150101928571 GA1.1.334573888.1734288897GS1.1.1734288897.1.0.1734288897.0.0.0GS1.1.1734288897.1.0.1734288897.0.0.0N4IgDgTgpgbg mAFgSwCYgFwgMIFEAcAggIwDMxAbAOwCsu2AnBdsQAzscdUAi rFrBgDoAtnAogAvkA
1 - 22 of 22 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
40FHS_eQTL77402125562228122634phs000342phs000363
41FHS_eGene_leadQTLs2133562228122634phs000342phs000363
46GTEx_Adipose_Subcutaneous202237023715323phs000424.v6phs000424.v6
48GTEx_Adrenal_Gland101115923715323phs000424.v6phs000424.v6
51GTEx_Artery_Tibial202236023715323phs000424.v6phs000424.v6
53GTEx_Brain_Caudate_basal_ganglia101113323715323phs000424.v6phs000424.v6
55GTEx_Brain_Cerebellum101113823715323phs000424.v6phs000424.v6
57GTEx_Brain_Frontal_Cortex_BA9101111523715323phs000424.v6phs000424.v6
61GTEx_Brain_Putamen_basal_ganglia101110323715323phs000424.v6phs000424.v6
62GTEx_Breast_Mammary_Tissue101121923715323phs000424.v6phs000424.v6
64GTEx_Cells_Transformed_fibroblasts202230523715323phs000424.v6phs000424.v6
68GTEx_Esophagus_Mucosa201232923715323phs000424.v6phs000424.v6
69GTEx_Esophagus_Muscularis101128123715323phs000424.v6phs000424.v6
70GTEx_Heart_Atrial_Appendage101121723715323phs000424.v6phs000424.v6
71GTEx_Heart_Left_Ventricle101124823715323phs000424.v6phs000424.v6
73GTEx_Lung201233823715323phs000424.v6phs000424.v6
74GTEx_Muscle_Skeletal201245423715323phs000424.v6phs000424.v6
80GTEx_Skin_Not_Sun_Exposed_Suprapubic101126923715323phs000424.v6phs000424.v6
81GTEx_Skin_Sun_Exposed_Lower_leg101138823715323phs000424.v6phs000424.v6
84GTEx_Stomach202220223715323phs000424.v6phs000424.v6
85GTEx_Testis101119923715323phs000424.v6phs000424.v6
89GTEx_Whole_Blood101143023715323phs000424.v6phs000424.v6
{ "section": "eqtl", "summary": "1 - 22 of 22"}

Get information.dbGaP Studies

No dbGaP study data found.
Modify Search { "section": "GAP", "summary": "No data found.", "retstart": 0, "pageSize": 50, "count": "" }
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