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dbVar

Database of genomic structural variation

nsv7143852

Organism: Homo sapiens

Study:nstd232 (Keane et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:74

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 375 SVs from 51 studies. See in: genome view

Remapped(Score: Perfect):2,085,599-2,085,672

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7143852	Remapped	Perfect	GRCh38.p12	Primary Assembly	Second Pass	NC_000008.11	Chr8	2,085,599	2,085,672
nsv7143852	Remapped	Perfect	GRCh38.p12	ALT_REF_LOCI_1	First Pass	NT_187576.1	Chr8\|NT_18 7576.1	268,943	269,016
nsv7143852	Submitted genomic		GRCh37.p13	Primary Assembly		NC_000008.10	Chr8	2,033,733	2,033,806

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18837641	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18837641	Remapped	Perfect	NT_187576.1:g.2689 43_269016del	GRCh38.p12	First Pass	NT_187576.1	Chr8\|NT_18 7576.1	268,943	269,016
nssv18837641	Remapped	Perfect	NC_000008.11:g.208 5599_2085672del	GRCh38.p12	Second Pass	NC_000008.11	Chr8	2,085,599	2,085,672
nssv18837641	Submitted genomic		NC_000008.10:g.203 3733_2033806del	GRCh37.p13		NC_000008.10	Chr8	2,033,733	2,033,806

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18837641	1	2	2

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