nsv7142501
- Organism: Homo sapiens
- Study:nstd232 (Keane et al. 2023)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:62
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 157 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 157 SVs from 27 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv7142501 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 33,757,458 | 33,757,519 |
| nsv7142501 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000019.9 | Chr19 | 34,248,363 | 34,248,424 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv18836294 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18836294 | Remapped | Perfect | NC_000019.10:g.337 57458_33757519del | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 33,757,458 | 33,757,519 |
| nssv18836294 | Submitted genomic | NC_000019.9:g.3424 8363_34248424del | GRCh37.p13 | NC_000019.9 | Chr19 | 34,248,363 | 34,248,424 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv18836294 | 0.5 | 2 | 4 |