nsv7095041
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:853,147
- Description:NC_000016.9:g.(?_74485954)_(75339100_?)dup AND Spastic paraplegia
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2798 SVs from 89 studies. See in: genome view
Overlapping variant regions from other studies: 2798 SVs from 89 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv7095041 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 74,452,056 | 75,305,202 |
| nsv7095041 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 74,485,954 | 75,339,100 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv18787643 | duplication | Multiple | Multiple | Spastic paraplegia; Spastic paraplegia | Uncertain significance | ClinVar | RCV003122645.2, VCV002426812.2 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18787643 | Remapped | Perfect | NC_000016.10:g.(?_ 74452056)_(7530520 2_?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 74,452,056 | 75,305,202 |
| nssv18787643 | Submitted genomic | NC_000016.9:g.(?_7 4485954)_(75339100 _?)dup | GRCh37 (hg19) | NC_000016.9 | Chr16 | 74,485,954 | 75,339,100 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv18787643 | GRCh37: NC_000016.9:g.(?_74485954)_(75339100_?)dup | duplication | germline | Spastic paraplegia; Spastic paraplegia | Uncertain significance | ClinVar | RCV003122645.2, VCV002426812.2 |