Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv7075724

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:12,178

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 119 SVs from 35 studies. See in: genome view

Submitted genomic116,161,594-116,173,771

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7075724	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	116,161,594	116,173,771
nsv7075724	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	117,921,106	117,933,283

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18746939	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18746939	Submitted genomic		NC_000010.11:g.116 161594_116173771in v	GRCh38 (hg38)		NC_000010.11	Chr10	116,161,594	116,173,771
nssv18746939	Remapped	Perfect	NC_000010.10:g.117 921106_117933283in v	GRCh37.p13	First Pass	NC_000010.10	Chr10	117,921,106	117,933,283

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18746939	9.7e-05	27	273656

You are here: NCBI