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dbVar

Database of genomic structural variation

nsv6766002

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:594,000

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2331 SVs from 93 studies. See in: genome view

Submitted genomic10,203,601-10,797,600

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6766002	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	10,203,601	10,797,600
nsv6766002	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	10,203,713	10,797,712

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18696715	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18696715	Submitted genomic		NC_000005.10:g.102 03601_10797600dup	GRCh38 (hg38)		NC_000005.10	Chr5	10,203,601	10,797,600
nssv18696715	Remapped	Perfect	NC_000005.9:g.1020 3713_10797712dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	10,203,713	10,797,712

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18696715	4e-06	1	272582

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