Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6633994

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:150,774

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 743 SVs from 80 studies. See in: genome view

Remapped(Score: Perfect):39,004,143-39,154,916

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6633994	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	39,004,143	39,154,916
nsv6633994	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000009.11	Chr9	39,004,140	39,154,913

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18285850	duplication	OSC2915	SNP array	Probe signal intensity	nssv18286228, nssv18286576
nssv18288208	deletion	OSC3236	SNP array	Probe signal intensity	nssv18287971, nssv18288207
nssv18288718	duplication	OSC3141	SNP array	Probe signal intensity	nssv18288715, nssv18288716, nssv18288717
nssv18294056	duplication	OSC4279	SNP array	Probe signal intensity	nssv18294293, nssv18294949, nssv18294950
nssv18306519	duplication	OSC0690	SNP array	Probe signal intensity	6
nssv18325686	duplication	OSC1787	SNP array	Probe signal intensity	nssv18325685

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18285850	Remapped	Perfect	NC_000009.12:g.(?_ 39004143)_(3915491 6_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	39,004,143	39,154,916
nssv18288208	Remapped	Perfect	NC_000009.12:g.(?_ 39004143)_(3915491 6_?)del	GRCh38.p12	First Pass	NC_000009.12	Chr9	39,004,143	39,154,916
nssv18288718	Remapped	Perfect	NC_000009.12:g.(?_ 39004143)_(3915491 6_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	39,004,143	39,154,916
nssv18294056	Remapped	Perfect	NC_000009.12:g.(?_ 39004143)_(3915491 6_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	39,004,143	39,154,916
nssv18306519	Remapped	Perfect	NC_000009.12:g.(?_ 39004143)_(3915491 6_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	39,004,143	39,154,916
nssv18325686	Remapped	Perfect	NC_000009.12:g.(?_ 39004143)_(3915491 6_?)dup	GRCh38.p12	First Pass	NC_000009.12	Chr9	39,004,143	39,154,916
nssv18285850	Submitted genomic		NC_000009.11:g.(?_ 39004140)_(3915491 3_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	39,004,140	39,154,913
nssv18288208	Submitted genomic		NC_000009.11:g.(?_ 39004140)_(3915491 3_?)del	GRCh37 (hg19)		NC_000009.11	Chr9	39,004,140	39,154,913
nssv18288718	Submitted genomic		NC_000009.11:g.(?_ 39004140)_(3915491 3_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	39,004,140	39,154,913
nssv18294056	Submitted genomic		NC_000009.11:g.(?_ 39004140)_(3915491 3_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	39,004,140	39,154,913
nssv18306519	Submitted genomic		NC_000009.11:g.(?_ 39004140)_(3915491 3_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	39,004,140	39,154,913
nssv18325686	Submitted genomic		NC_000009.11:g.(?_ 39004140)_(3915491 3_?)dup	GRCh37 (hg19)		NC_000009.11	Chr9	39,004,140	39,154,913

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI