nsv6633416
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:391,159
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3871 SVs from 100 studies. See in: genome view
Overlapping variant regions from other studies: 3875 SVs from 100 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6633416 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 11,976,830 | 12,367,988 |
| nsv6633416 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 11,976,830 | 12,367,988 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18290613 | deletion | OSC3632 | SNP array | Probe signal intensity | 9 |
| nssv18293337 | deletion | OSC0411 | SNP array | Probe signal intensity | 8 |
| nssv18325442 | deletion | OSC0188 | SNP array | Probe signal intensity | nssv18325150, nssv18325448, nssv18324775 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18290613 | Remapped | Perfect | NC_000009.12:g.(?_ 11976830)_(1236798 8_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 11,976,830 | 12,367,988 |
| nssv18293337 | Remapped | Perfect | NC_000009.12:g.(?_ 11976830)_(1236798 8_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 11,976,830 | 12,367,988 |
| nssv18325442 | Remapped | Perfect | NC_000009.12:g.(?_ 11976830)_(1236798 8_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 11,976,830 | 12,367,988 |
| nssv18290613 | Submitted genomic | NC_000009.11:g.(?_ 11976830)_(1236798 8_?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 11,976,830 | 12,367,988 | ||
| nssv18293337 | Submitted genomic | NC_000009.11:g.(?_ 11976830)_(1236798 8_?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 11,976,830 | 12,367,988 | ||
| nssv18325442 | Submitted genomic | NC_000009.11:g.(?_ 11976830)_(1236798 8_?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 11,976,830 | 12,367,988 |