Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6631124

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:8
Validation:Not tested
Clinical Assertions: No
Region Size:245,398

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1895 SVs from 96 studies. See in: genome view

Remapped(Score: Perfect):167,947,879-168,193,276

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6631124	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nsv6631124	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	168,348,559	168,593,956

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18283022	duplication	OSC2374	SNP array	Probe signal intensity	7
nssv18283978	duplication	OSC2401	SNP array	Probe signal intensity	8
nssv18284934	duplication	OSC2641	SNP array	Probe signal intensity	7
nssv18286839	duplication	OSC3095	SNP array	Probe signal intensity	6
nssv18291195	duplication	OSC3595	SNP array	Probe signal intensity	8
nssv18291857	duplication	OSC3884	SNP array	Probe signal intensity	8
nssv18293674	duplication	OSC4028	SNP array	Probe signal intensity	5
nssv18322857	duplication	OSC1480	SNP array	Probe signal intensity	nssv18323408, nssv18323409, nssv18323410

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18283022	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18283978	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18284934	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18286839	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18291195	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18291857	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18293674	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18322857	Remapped	Perfect	NC_000006.12:g.(?_ 167947879)_(168193 276_?)dup	GRCh38.p12	First Pass	NC_000006.12	Chr6	167,947,879	168,193,276
nssv18283022	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956
nssv18283978	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956
nssv18284934	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956
nssv18286839	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956
nssv18291195	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956
nssv18291857	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956
nssv18293674	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956
nssv18322857	Submitted genomic		NC_000006.11:g.(?_ 168348559)_(168593 956_?)dup	GRCh37 (hg19)		NC_000006.11	Chr6	168,348,559	168,593,956

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI