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dbVar

Database of genomic structural variation

nsv6630860

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:54,542

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 276 SVs from 56 studies. See in: genome view

Remapped(Score: Perfect):64,416,373-64,470,914

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6630860	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	64,416,373	64,470,914
nsv6630860	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	63,712,200	63,766,741

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18302915	deletion	OSC5901	SNP array	Probe signal intensity	7
nssv18303063	deletion	OSC6000	SNP array	Probe signal intensity	11
nssv18306775	deletion	OSC6667	SNP array	Probe signal intensity	5
nssv18313703	deletion	OSC7856	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18302915	Remapped	Perfect	NC_000005.10:g.(?_ 64416373)_(6447091 4_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	64,416,373	64,470,914
nssv18303063	Remapped	Perfect	NC_000005.10:g.(?_ 64416373)_(6447091 4_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	64,416,373	64,470,914
nssv18306775	Remapped	Perfect	NC_000005.10:g.(?_ 64416373)_(6447091 4_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	64,416,373	64,470,914
nssv18313703	Remapped	Perfect	NC_000005.10:g.(?_ 64416373)_(6447091 4_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	64,416,373	64,470,914
nssv18302915	Submitted genomic		NC_000005.9:g.(?_6 3712200)_(63766741 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	63,712,200	63,766,741
nssv18303063	Submitted genomic		NC_000005.9:g.(?_6 3712200)_(63766741 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	63,712,200	63,766,741
nssv18306775	Submitted genomic		NC_000005.9:g.(?_6 3712200)_(63766741 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	63,712,200	63,766,741
nssv18313703	Submitted genomic		NC_000005.9:g.(?_6 3712200)_(63766741 _?)del	GRCh37 (hg19)		NC_000005.9	Chr5	63,712,200	63,766,741

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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