nsv6629951

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:36
Validation:Not tested
Clinical Assertions: No
Region Size:34,154

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1410 SVs from 82 studies. See in: genome view

Remapped(Score: Perfect):68,535,454-68,569,607

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6629951	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nsv6629951	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	69,401,172	69,435,325

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18301613	duplication	OSC5796	SNP array	Probe signal intensity	9
nssv18301617	duplication	OSC5798	SNP array	Probe signal intensity	10
nssv18303146	deletion	OSC6053	SNP array	Probe signal intensity	8
nssv18303798	duplication	OSC6041	SNP array	Probe signal intensity	7
nssv18304457	duplication	OSC6097	SNP array	Probe signal intensity	nssv18303869, nssv18303870, nssv18304116
nssv18305059	duplication	OSC6288	SNP array	Probe signal intensity	6
nssv18306270	deletion	OSC6498	SNP array	Probe signal intensity	10
nssv18306762	duplication	OSC6655	SNP array	Probe signal intensity	7
nssv18307062	deletion	OSC6637	SNP array	Probe signal intensity	7
nssv18307429	duplication	OSC6663	SNP array	Probe signal intensity	10
nssv18308441	duplication	OSC6732	SNP array	Probe signal intensity	9
nssv18310884	deletion	OSC7150	SNP array	Probe signal intensity	10
nssv18314098	deletion	OSC7821	SNP array	Probe signal intensity	9
nssv18314903	duplication	OSC8021	SNP array	Probe signal intensity	16
nssv18315008	duplication	OSC8102	SNP array	Probe signal intensity	7
nssv18315150	deletion	OSC8188	SNP array	Probe signal intensity	6
nssv18316594	deletion	OSC8285	SNP array	Probe signal intensity	15
nssv18316961	duplication	OSC8341	SNP array	Probe signal intensity	10
nssv18317056	deletion	OSC8268	SNP array	Probe signal intensity	6
nssv18317114	duplication	OSC8300	SNP array	Probe signal intensity	15
nssv18317190	duplication	OSC8339	SNP array	Probe signal intensity	10
nssv18317518	deletion	OSC8521	SNP array	Probe signal intensity	7
nssv18317608	duplication	OSC8595	SNP array	Probe signal intensity	nssv18318249, nssv18318900, nssv18318901
nssv18317747	deletion	OSC8420	SNP array	Probe signal intensity	9
nssv18317769	duplication	OSC8435	SNP array	Probe signal intensity	8
nssv18318168	duplication	OSC8530	SNP array	Probe signal intensity	8
nssv18318253	duplication	OSC8597	SNP array	Probe signal intensity	10
nssv18318274	deletion	OSC8429	SNP array	Probe signal intensity	7
nssv18318307	duplication	OSC8453	SNP array	Probe signal intensity	13
nssv18318496	duplication	OSC8579	SNP array	Probe signal intensity	10
nssv18318902	duplication	OSC8596	SNP array	Probe signal intensity	9
nssv18319356	deletion	OSC8721	SNP array	Probe signal intensity	11
nssv18319535	deletion	OSC8658	SNP array	Probe signal intensity	12
nssv18319796	duplication	OSC8819	SNP array	Probe signal intensity	9
nssv18320169	deletion	OSC8814	SNP array	Probe signal intensity	7
nssv18320183	duplication	OSC8824	SNP array	Probe signal intensity	10

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18301613	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18301617	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18303146	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18303798	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18304457	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18305059	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18306270	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18306762	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18307062	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18307429	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18308441	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18310884	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18314098	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18314903	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18315008	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18315150	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18316594	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18316961	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18317056	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18317114	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18317190	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18317518	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18317608	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18317747	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18317769	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18318168	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18318253	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18318274	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18318307	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18318496	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18318902	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18319356	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18319535	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18319796	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18320169	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18320183	Remapped	Perfect	NC_000004.12:g.(?_ 68535454)_(6856960 7_?)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,535,454	68,569,607
nssv18301613	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18301617	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18303146	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18303798	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18304457	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18305059	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18306270	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18306762	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18307062	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18307429	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18308441	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18310884	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18314098	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18314903	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18315008	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18315150	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18316594	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18316961	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18317056	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18317114	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18317190	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18317518	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18317608	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18317747	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18317769	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18318168	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18318253	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18318274	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18318307	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18318496	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18318902	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18319356	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18319535	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18319796	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18320169	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325
nssv18320183	Submitted genomic		NC_000004.11:g.(?_ 69401172)_(6943532 5_?)dup	GRCh37 (hg19)		NC_000004.11	Chr4	69,401,172	69,435,325

dbVar

Database of genomic structural variation

nsv6629951

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant