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nsv6627589

  • Variant Calls:25
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:18,929

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 1310 SVs from 88 studies. See in: genome view    
Remapped(Score: Perfect):241,984,230-242,003,158Question Mark
Overlapping variant regions from other studies: 721 SVs from 63 studies. See in: genome view    
Remapped(Score: Perfect):22,925-41,853Question Mark
Overlapping variant regions from other studies: 721 SVs from 63 studies. See in: genome view    
Remapped(Score: Perfect):22,925-41,853Question Mark
Overlapping variant regions from other studies: 1310 SVs from 88 studies. See in: genome view    
Submitted genomic242,926,381-242,945,309Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv6627589RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000002.12Chr2241,984,230242,003,158
nsv6627589RemappedPerfectGRCh38.p12ALT_REF_LOCI_1Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nsv6627589RemappedPerfectGRCh38.p12ALT_REF_LOCI_2Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nsv6627589Submitted genomicGRCh37 (hg19)Primary AssemblyNC_000002.11Chr2242,926,381242,945,309

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv18282374deletionOSC2125SNP arrayProbe signal intensity5
nssv18283663deletionOSC0248SNP arrayProbe signal intensitynssv18283035, nssv18283316, nssv18283669
nssv18283987deletionOSC2405SNP arrayProbe signal intensity7
nssv18285204deletionOSC2599SNP arrayProbe signal intensity8
nssv18286390deletionOSC2795SNP arrayProbe signal intensity12
nssv18287360deletionOSC3072SNP arrayProbe signal intensity5
nssv18288038deletionOSC3282SNP arrayProbe signal intensity7
nssv18289130deletionOSC3410SNP arrayProbe signal intensity7
nssv18289824deletionOSC3497SNP arrayProbe signal intensitynssv18289247, nssv18289494
nssv18290917deletionOSC3613SNP arrayProbe signal intensity9
nssv18292135deletionOSC3822SNP arrayProbe signal intensity7
nssv18292152deletionOSC3831SNP arrayProbe signal intensity9
nssv18292485deletionOSC3842SNP arrayProbe signal intensitynssv18291584, nssv18292486
nssv18292751deletionOSC4011SNP arrayProbe signal intensity7
nssv18293627deletionOSC4224SNP arrayProbe signal intensity6
nssv18294268deletionOSC0041SNP arrayProbe signal intensity5
nssv18297456deletionOSC4765SNP arrayProbe signal intensity6
nssv18321456deletionOSC1149SNP arrayProbe signal intensity6
nssv18321733deletionOSC1161SNP arrayProbe signal intensity8
nssv18324520deletionOSC1613SNP arrayProbe signal intensitynssv18323957
nssv18324605deletionOSC0174SNP arrayProbe signal intensity5
nssv18324943deletionOSC1906SNP arrayProbe signal intensity11
nssv18325210deletionOSC1842SNP arrayProbe signal intensity6
nssv18325903deletionOSC1943SNP arrayProbe signal intensity6
nssv18325949deletionOSC0205SNP arrayProbe signal intensity7

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv18282374RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18282374RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18283663RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18283663RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18283987RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18283987RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18285204RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18285204RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18286390RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18286390RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18287360RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18287360RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18288038RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18288038RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18289130RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18289130RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18289824RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18289824RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18290917RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18290917RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18292135RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18292135RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18292152RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18292152RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18292485RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18292485RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18292751RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18292751RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18293627RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18293627RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18294268RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18294268RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18297456RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18297456RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18321456RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18321456RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18321733RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18321733RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18324520RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18324520RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18324605RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18324605RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18324943RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18324943RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18325210RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18325210RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18325903RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18325903RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18325949RemappedPerfectNT_187523.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187523.1Chr2|NT_18
7523.1
22,92541,853
nssv18325949RemappedPerfectNT_187647.1:g.(?_2
2925)_(41853_?)del
GRCh38.p12Second PassNT_187647.1Chr2|NT_18
7647.1
22,92541,853
nssv18282374RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18283663RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18283987RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18285204RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18286390RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18287360RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18288038RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18289130RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18289824RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18290917RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18292135RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18292152RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18292485RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18292751RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18293627RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18294268RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18297456RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18321456RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18321733RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18324520RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18324605RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18324943RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18325210RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18325903RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18325949RemappedPerfectNC_000002.12:g.(?_
241984230)_(242003
158_?)del
GRCh38.p12First PassNC_000002.12Chr2241,984,230242,003,158
nssv18282374Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18283663Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18283987Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18285204Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18286390Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18287360Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18288038Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18289130Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18289824Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18290917Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18292135Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18292152Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18292485Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18292751Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18293627Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18294268Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18297456Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18321456Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18321733Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18324520Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18324605Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18324943Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18325210Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18325903Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309
nssv18325949Submitted genomicNC_000002.11:g.(?_
242926381)_(242945
309_?)del
GRCh37 (hg19)NC_000002.11Chr2242,926,381242,945,309

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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